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Merger trees track the hierarchical assembly of dark matter halos across cosmic time and serve as essential inputs for semi-analytic models of galaxy formation. However, conventional methods for constructing merger trees rely on ad-hoc…

Astrophysics of Galaxies · Physics 2025-10-02 Tri Nguyen , Chirag Modi , Siddharth Mishra-Sharma , L. Y. Aaron Yung , Rachel S. Somerville

A key ingredient for semi-analytic models (SAMs) of galaxy formation is the mass assembly history of haloes, encoded in a tree structure. The most commonly used method to construct halo merger histories is based on the outcomes of…

Astrophysics of Galaxies · Physics 2022-06-28 Sandra Robles , Jonathan S. Gómez , Adín Ramírez Rivera , Nelson D. Padilla , Diego Dujovne

We present a new algorithm for generating merger trees and halo catalogs which explicitly ensures consistency of halo properties (mass, position, and velocity) across timesteps. Our algorithm has demonstrated the ability to improve both the…

Cosmology and Nongalactic Astrophysics · Physics 2013-01-15 Peter S. Behroozi , Risa H. Wechsler , Hao-Yi Wu , Michael T. Busha , Anatoly A. Klypin , Joel R. Primack

Galaxy formation and evolution models, such as semi-analytic models, are powerful theoretical tools for predicting how galaxies evolve across cosmic time. These models follow the evolution of galaxies based on the halo assembly histories…

We present a simple and efficient empirical algorithm for constructing dark-matter halo merger trees that reproduce the distribution of trees in the Millennium cosmological $N$-body simulation. The generated trees are significantly better…

Astrophysics · Physics 2009-11-13 Eyal Neistein , Avishai Dekel

Linking the properties of galaxies to the assembly history of their dark matter haloes is a central aim of galaxy evolution theory. This paper introduces a dimensionless parameter $s\in[0,1]$, the "tree entropy", to parametrise the geometry…

Astrophysics of Galaxies · Physics 2020-02-14 Danail Obreschkow , Pascal J. Elahi , Claudia del P. Lagos , Rhys J. J. Poulton , Aaron D. Ludlow

We present an algorithm to extend subhalo merger trees in a low-resolution dark-matter-only simulation by conditionally matching them to those in a high-resolution simulation. The algorithm is general and can be applied to simulation data…

Astrophysics of Galaxies · Physics 2025-04-08 Yangyao Chen , H. J. Mo , Cheng Li , Kai Wang , Huiyuan Wang , Xiaohu Yang

The merging history of dark matter halos is computed with the Merging Cell Model proposed by Rodrigues & Thomas (1996). While originally discussed in the case of scale-free power spectra, it is developed and tested here in the framework of…

Astrophysics · Physics 2009-10-31 Barbara Lanzoni , Gary A. Mamon , Bruno Guiderdoni

We introduce a novel halo/galaxy matching technique between two cosmological simulations with different resolutions, which utilizes the positions and masses of halos along their subhalo merger tree. With this tool, we conduct a study of…

Astrophysics of Galaxies · Physics 2024-04-19 Minyong Jung , Ji-hoon Kim , Boon Kiat Oh , Sungwook E. Hong , Jaehyun Lee , Juhan Kim

We evaluate the accuracy of semi-analytic merger-trees by comparing them with the merging histories of dark-matter halos in N-body simulations, focusing on the joint distribution of the number of progenitors and their masses. We first…

Astrophysics · Physics 2009-10-30 Rachel S. Somerville , Gerard Lemson , Tsafrir S. Kolatt , Avishai Dekel

We describe a simple efficient algorithm that allows one to construct Monte-Carlo realizations of merger histories of dark matter halos. The algorithm is motivated by the excursion set model (Bond et al. 1991) for the conditional and…

Astrophysics · Physics 2009-10-30 Ravi K. Sheth , Gerard Lemson

The effects of spatial correlations of density fluctuations on merger histories of dark matter haloes (so-called `{\it merger trees}') are analysed. We compare the mass functions of dark haloes derived by a new method for calculating merger…

Astrophysics · Physics 2015-06-24 Masahiro Nagashima , Naoteru Gouda

In a previous paper, we described a new method for including detailed information about substructure in semi-analytic models of halo formation based on merger trees. In this paper, we compare the predictions of our model with results from…

Astrophysics · Physics 2009-11-10 James E. Taylor , Arif Babul

We have constructed the merging history of dark matter halos in a SCDM cosmology, by means of a the {``Merging Cell Model''} (Rodrigues & Thomas 1996). It is based on the linear theory of growth of density fluctuations, and the Top-Hat…

Astrophysics · Physics 2007-05-23 Barbara Lanzoni , Gary A. Mamon , Bruno Guiderdoni

We propose a common terminology for use in describing both temporal merger trees and spatial structure trees for dark-matter halos. We specify a unified data format in HDF5 and provide example I/O routines in C, FORTRAN and PYTHON.

We construct merger trees from the largest database of dark matter haloes to date provided by the Millennium simulation to quantify the merger rates of haloes over a broad range of descendant halo mass (1e12 < M0 < 1e15 Msun), progenitor…

Astrophysics · Physics 2009-11-13 Onsi Fakhouri , Chung-Pei Ma

The cosmic web plays a major role in the formation and evolution of galaxies and defines, to a large extent, their properties. However, the relation between galaxies and environment is still not well understood. Here we present a machine…

Astrophysics of Galaxies · Physics 2018-04-11 Jianan Hui , Miguel A. Aragon-Calvo , Xinping Cui , James M. Flegal

Scalar field comparison is a fundamental task in scientific visualization. In topological data analysis, we compare topological descriptors of scalar fields -- such as persistence diagrams and merge trees -- because they provide succinct…

Computational Geometry · Computer Science 2024-09-18 Weiran Lyu , Raghavendra Sridharamurthy , Jeff M. Phillips , Bei Wang

Dark matter subhalos are the remnants of (incomplete) halo mergers. Identifying them and establishing their evolutionary links in the form of merger trees is one of the most important applications of cosmological simulations. The…

Cosmology and Nongalactic Astrophysics · Physics 2017-12-13 Jiaxin Han , Shaun Cole , Carlos S. Frenk , Alejandro Benitez-Llambay , John Helly

The implementation of ACACIA, a new algorithm to generate dark matter halo merger trees with the Adaptive Mesh Refinement (AMR) code RAMSES, is presented. The algorithm is fully parallel and based on the Message Passing Interface (MPI). As…

Astrophysics of Galaxies · Physics 2021-11-25 Mladen Ivkovic , Romain Teyssier