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We use x-ray photon correlation spectroscopy to investigate the dynamics of a high volume fraction emulsion creaming under gravity. The dodecane-in-water emulsion has interfaces stabilized solely by colloidal particles (silica). The samples…

Soft Condensed Matter · Physics 2009-11-13 E. M. Herzig , A. Robert , D. D. van 't Zand , L. Cipelletti , P. N. Pusey , P. S. Clegg

Molecular dynamics simulations have been performed on TIP4P/2005 supercooled water to investigate the molecular diffusion and shear viscosity at various timescales and assess the Stokes-Einstein (SE) and Stokes-Einstein-Debye (SED)…

Soft Condensed Matter · Physics 2019-08-12 Takeshi Kawasaki , Kang Kim

Although tissues are usually studied in isolation, this situation rarely occurs in biology, as cells, tissues, and organs, coexist and interact across scales to determine both shape and function. Here, we take a quantitative approach…

Tissues and Organs · Quantitative Biology 2023-02-07 Carles Falcó , Daniel J. Cohen , José A. Carrillo , Ruth E. Baker

The formation of biomolecular materials via dynamical interfacial processes such as self-assembly and fusion, for diverse compositions and external conditions, can be efficiently probed using ensemble Molecular Dynamics. However, this…

The rheology of cohesive granular materials, under a constant pressure condition, is studied using molecular dynamics simulations. Depending on the shear rate, pressure, and interparticle cohesiveness, the system exhibits four distinctive…

Soft Condensed Matter · Physics 2018-09-26 Yuta Yamaguchi , Satoshi Takada , Takahiro Hatano

Coupled length and time scales determine the dynamic behavior of polymers and underlie their unique viscoelastic properties. To resolve the long-time dynamics it is imperative to determine which time and length scales must be correctly…

Soft Condensed Matter · Physics 2016-02-16 K. Michael Salerno , Anupriya Agrawal , Dvora Perahia , Gary S. Grest

Event-driven molecular dynamics simulations are carried out on two rigid body systems which differ in the symmetry of their molecular mass distributions. First, simulations of methane in which the molecules interact via discontinuous…

Statistical Mechanics · Physics 2007-05-23 Lisandro Hernandez de la Pena , Ramses van Zon , Jeremy Schofield , Sheldon B. Opps

Irradiation- and collision-induced fragmentation studies provide information about geometry, electronic properties and interactions between structural units of various molecular systems. Such knowledge brings insights into…

Chemical Physics · Physics 2021-07-28 Pablo de Vera , Alexey Verkhovtsev , Gennady Sushko , Andrey V. Solov'yov

The simulation of chemical reactions is an anticipated application of quantum computers. Using a Diels-Alder reaction as a test case, in this study we explore the potential applications of quantum algorithms and hardware in investigating…

The precise arrangement of different chemical moieties in a polymer determines its thermophysical properties. How the sequence of moieties impacts the properties of a polymer is an outstanding problem in polymer science. Herein, we address…

Soft Condensed Matter · Physics 2025-08-26 Sandeep Parma , R. Nagaranajan , Tarak K Patra

Phase-separated biomolecular condensates exhibit a wide range of dynamical properties, which depend on the sequences of the constituent proteins and RNAs. However, it is unclear to what extent condensate dynamics can be tuned without also…

Biomolecules · Quantitative Biology 2024-07-31 Yaxin An , Michael A. Webb , William M. Jacobs

Mixtures of several macromolecular species can lead to the formation of higher-order structures that often display non-ideal mixing behavior. In this work, we propose a minimal model of a quaternary system which considers the formation of a…

Soft Condensed Matter · Physics 2022-12-14 Ruoyao Zhang , Sheng Mao , Mikko Haataja

The polymer dynamics of homogeneous C$_{60}$-polystyrene mixtures in the molten state are studied via molecular simulations using two interconnected levels of representation for polystyrene nanocomposites: (a) A coarse-grained…

Soft Condensed Matter · Physics 2014-01-20 Georgios G. Vogiatzis , Doros N. Theodorou

Benzene, a hexagonal molecule with formula C$_6$H$_6$, is one of the most important aromatic hydrocarbons. Its structure arises from the $sp^{2}$ hybridization from which three in-plane $\sigma$-bonds are formed. A fourth $\pi$-orbital…

Considering much distresses occurring at the surface of the asphalt roads, self-healing phenomenon attracted much attention because of reducing the road surface distresses and its benefits. The use of polymers, which are mainly used to…

Applied Physics · Physics 2019-09-04 Mohammadjavad Kazemi , Ahmad Goli , Abbas Mohammadi , Mohsen Aboutalebi Esfahani

We consider the dynamic wetting and dewetting processes of films and droplets of complex liquids on planar surfaces, focusing on the case of colloidal suspensions, where the particle interactions can be sufficiently attractive to cause…

Fluid Dynamics · Physics 2024-11-20 J. Zhang , D. N. Sibley , D. Tseluiko , A. J. Archer

Dust plays a key role in the evolution of the ISM and its correct modelling in numerical simulations is therefore fundamental. We present a new and self-consistent model that treats grain thermal coupling with the gas, radiation balance,…

Astrophysics of Galaxies · Physics 2017-01-25 T. Grassi , S. Bovino , T. Haugboelle , D. R. G. Schleicher

Molecular modelling and simulation as well as four equations of state (EOS) are applied to natural gas mixtures regarding Joule-Thomson (JT) inversion. JT inversion curves are determined by molecular simulation for six different natural gas…

Chemical Physics · Physics 2009-04-24 J. Vrabec , A. Kumar , H. Hasse

Kinetically constrained models (KCM) are systems with trivial thermodynamics but often complex dynamical behavior due to constraints on the accessible paths followed by the system. Exploring these properties, the Kob-Andersen (KA) model was…

Soft Condensed Matter · Physics 2010-05-12 Jeferson J. Arenzon

Amoeboid cell motility is relevant in a wide variety of biomedical applications such as wound healing, cancer metastasis, and embryonic morphogenesis. It is characterized by pronounced changes of the cell shape associated with expansions…

Cell Behavior · Quantitative Biology 2022-10-25 Daniel Schindler , Ted Moldenhawer , Carsten Beta , Wilhelm Huisinga , Matthias Holschneider
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