Related papers: Cloudbreak: Accurate and Scalable Genomic Structur…
Very deep convolutional neural networks (CNNs) have been firmly established as the primary methods for many computer vision tasks. However, most state-of-the-art CNNs are large, which results in high inference latency. Recently, depth-wise…
Graph Neural Networks (GNNs) have demonstrated impressive performance across diverse graph-based tasks by leveraging message passing to capture complex node relationships. However, on large-scale real-world graphs, GNNs face two major…
Co-clustering simultaneously clusters rows and columns, revealing more fine-grained groups. However, existing co-clustering methods suffer from poor scalability and cannot handle large-scale data. This paper presents a novel and scalable…
In many applications such as copy number variant (CNV) detection, the goal is to identify short segments on which the observations have different means or medians from the background. Those segments are usually short and hidden in a long…
Recent research shows that copying is prevalent for Deep-Web data and considering copying can significantly improve truth finding from conflicting values. However, existing copy detection techniques do not scale for large sizes and numbers…
Community detection seeks to recover mesoscopic structure from network data that may be binary, count-valued, signed, directed, weighted, or multilayer. The stochastic block model (SBM) explains such structure by positing a latent partition…
One of the most widely studied problem in mining and analysis of complex networks is the detection of community structures. The problem has been extensively studied by researchers due to its high utility and numerous applications in various…
The large size of DNNs poses a significant challenge for deployment on devices with limited resources, such as mobile, edge, and IoT platforms. To address this issue, a distributed inference framework can be utilized. In this framework, a…
Large graphs commonly appear in social networks, knowledge graphs, recommender systems, life sciences, and decision making problems. Summarizing large graphs by their high level properties is helpful in solving problems in these settings.…
Spatial transcriptomics (ST) technologies enable transcriptome-wide gene expression profiling while preserving spatial resolution, offering unprecedented opportunities to uncover complex spatial structures. Due to the ultra-high…
Hierarchical clustering and community detection are important problems in machine learning and complex network analysis. A common approach to identify clusters is to simply cut dendrograms at some threshold. However, single-level cuts are…
Database fingerprinting has been widely used to discourage unauthorized redistribution of data by providing means to identify the source of data leakages. However, there is no fingerprinting scheme aiming at achieving liability guarantees…
Based on our observations of infrared targets, serious scale variation along within sequence frames has high-frequently occurred. In this paper, we propose a dynamic re-parameterization network (DRPN) to deal with the scale variation and…
Estimating the number of clusters and cluster structures in unlabeled, complex, and high-dimensional datasets (like images) is challenging for traditional clustering algorithms. In recent years, a matrix reordering-based algorithm called…
To detect large-variance code clones (i.e. clones with relatively more differences) in large-scale code repositories is difficult because most current tools can only detect almost identical or very similar clones. It will make promotion and…
We propose a novel probabilistic dimensionality reduction framework that can naturally integrate the generative model and the locality information of data. Based on this framework, we present a new model, which is able to learn a smooth…
Spatial transcriptomics has revolutionized tissue analysis by simultaneously mapping gene expression, spatial topography, and histological context across consecutive tissue sections, enabling systematic investigation of spatial…
Code sandboxes have emerged as a critical infrastructure for advancing the coding capabilities of large language models, providing verifiable feedback for both RL training and evaluation. However, existing systems fail to provide accurate…
Motivation: In this paper we present the latest release of EBIC, a next-generation biclustering algorithm for mining genetic data. The major contribution of this paper is adding support for big data, making it possible to efficiently run…
Graph embeddings have emerged as a powerful tool for understanding the structure of graphs. Unlike classical spectral methods, recent methods such as DeepWalk, Node2Vec, etc. are based on solving nonlinear optimization problems on the…