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Homomorphism indistinguishability is a way of characterising many natural equivalence relations on graphs. Two graphs $G$ and $H$ are called homomorphism indistinguishable over a graph class $\mathcal{F}$ if for each $F \in \mathcal{F}$,…
A homomorphism from a graph $G$ to a graph $H$ is an edge-preserving mapping from $V(G)$ to $V(H)$. For a fixed graph $H$, in the list homomorphism problem, denoted by LHom($H$), we are given a graph $G$, whose every vertex $v$ is equipped…
A graph database is a digraph whose arcs are labeled with symbols from a fixed alphabet. A regular graph pattern (RGP) is a digraph whose edges are labeled with regular expressions over the alphabet. RGPs model navigational queries for…
We identify the complexity of the classification problem for automorphisms of a given countable regularly branching tree up to conjugacy. We consider both the rooted and unrooted cases. Additionally, we calculate the complexity of the…
We present a mathematical framework for describing the topology of configuration spaces for particles on one-connected graphs. In particular, we compute the homology groups over integers for different classes of one-connected graphs. Our…
Two graphs are homomorphism indistinguishable over a graph class $\mathcal{F}$, denoted by $G \equiv_{\mathcal{F}} H$, if $\operatorname{hom}(F,G) = \operatorname{hom}(F,H)$ for all $F \in \mathcal{F}$ where $\operatorname{hom}(F,G)$…
The presented work focuses on problems from determinant theory, set theory and topology. The term graph is the binding element that connects these problems. Graphs are distinguished by their geometrical simplicity, which helps in showing…
In Chapter 1 we fully characterise pairs of finite graphs which form a gap in the full homomorphism order. This leads to a simple proof of the existence of generalised duality pairs. We also discuss how such results can be carried to…
Most parameterized complexity classes are defined in terms of a parameterized version of the Boolean satisfiability problem (the so-called weighted satisfiability problem). For example, Downey and Fellow's W-hierarchy is of this form. But…
Finding structural similarities in graph data, like social networks, is a far-ranging task in data mining and knowledge discovery. A (conceptually) simple reduction would be to compute the automorphism group of a graph. However, this…
Graph product structure theory expresses certain graphs as subgraphs of the strong product of much simpler graphs. In particular, an elegant formulation for the corresponding structural theorems involves the strong product of a path and of…
Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…
We study consistent query answering via different graph representations. First, we introduce solution-conflict hypergraphs in which nodes represent facts and edges represent either conflicts or query solutions. Considering a monotonic query…
In the course of classifying the homogeneous permutations, Cameron introduced the viewpoint of permutations as structures in a language of two linear orders, and this structural viewpoint is taken up here. The majority of this thesis is…
Conjunctive queries select and are expected to return certain tuples from a relational database. We study the potentially easier problem of counting all selected tuples, rather than enumerating them. In particular, we are interested in the…
Graph neural networks (GNNs) based methods have achieved impressive performance on node clustering task. However, they are designed on the homophilic assumption of graph and clustering on heterophilic graph is overlooked. Due to the lack of…
Given a graph $G$, we define a filtration of simplicial complexes associated to $G$, $\mathcal{F}_0(G)\subseteq\mathcal{F}_1(G)\subseteq\cdots\subseteq\mathcal{F}_\infty(G)$ where the first complex is the independence complex and the last…
For a sequence of random structures with $n$-element domains over a relational signature, we define its first order (FO) complexity as a certain subset in the Banach space $\ell^{\infty}/c_0$. The well-known FO zero-one law and FO…
In the past, the dichotomy between homophily and heterophily has inspired research contributions toward a better understanding of Deep Graph Networks' inductive bias. In particular, it was believed that homophily strongly correlates with…
We consider a core language of graph queries. These queries are seen as formulas to be solved with respect to graph-oriented databases. For this purpose, we first define a graph query algebra where some operations over graphs and sets of…