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In cells, most of cargos are transported by motor proteins along microtubule. Biophysically, unidirectional motion of large number of motor proteins along a single track can be described by totally asymmetric simple exclusion process…

Subcellular Processes · Quantitative Biology 2015-03-06 Minghua Song , Yunxin Zhang

We introduce a model of a totally asymmetric simple exclusion process (TASEP) on a tree network where the aggregate hopping rate is constant from level to level. With this choice for hopping rates the model shows the same phase diagram as…

Statistical Mechanics · Physics 2013-11-12 Peter Mottishaw , Bartlomiej Waclaw , Martin R. Evans

We present a simplified description for spin-dependent electronic transport in honeycomb-lattice structures with spin-orbit interactions, using generalizations of the stochastic non-equilibrium model known as the totally asymmetric simple…

Statistical Mechanics · Physics 2017-04-19 S. L. A. de Queiroz , R. B. Stinchcombe

We explore how the interplay of finite availability, carrying capacity of particles at different parts of a spatially extended system and particle diffusion between them control the steady state currents and density profiles in a…

Statistical Mechanics · Physics 2024-12-04 Sourav Pal , Parna Roy , Abhik Basu

We present a mean-field theory for the dynamics of driven flow with exclusion in graphenelike structures, and numerically check its predictions. We treat first a specific combination of bond transmissivity rates, where mean field predicts,…

Statistical Mechanics · Physics 2015-05-05 R. B. Stinchcombe , S. L. A. de Queiroz

We introduce a new model to study the oscillations of opposite flows sharing a common bottleneck and moving on two Totally Asymmetric Simple Exclusion Process (TASEP) lanes. We provide a theoretical analysis of the phase diagram, valid when…

Statistical Mechanics · Physics 2012-06-15 Asja Jelić , Cécile Appert-Rolland , Ludger Santen

Graphene nanoribbons and constrictions are envisaged as fundamental components of future carbon-based nanoelectronic and spintronic devices. At nanoscale, electronic effects in these devices depend heavily on the dimensions of the active…

Electron transport in small graphene nanoribbons is studied by microwave emulation experiments and tight-binding calculations. In particular, it is investigated under which conditions a transport gap can be observed. Our experiments provide…

Mesoscale and Nanoscale Physics · Physics 2017-01-18 Thomas Stegmann , John A. Franco-Villafañe , Ulrich Kuhl , Fabrice Mortessagne , Thomas H. Seligman

We revisit the totally asymmetric simple exclusion process with open boundaries (TASEP), focussing on the recent discovery by de Gier and Essler that the model has a dynamical transition along a nontrivial line in the phase diagram. This…

Statistical Mechanics · Physics 2015-05-20 A. Proeme , R. A. Blythe , M. R. Evans

Exclusion processes in one dimension first appeared in the 70s and have since dragged much attention from communities in different domains: stochastic processes, out-of-equilibriums statistical physics, and more recently integrable systems.…

Statistical Mechanics · Physics 2023-01-11 Ali Zahra

We extend the paradigmatic and versatile TASEP (Totally Asymmetric Simple Exclusion Process) for stochastic 1d transport to allow for two different particle species, each having specific entry and exit rates. We offer a complete mean-field…

Statistical Mechanics · Physics 2022-04-06 Pierre Bonnin , Ian Stansfield , M. Carmen Romano , Norbert Kern

We study a continuous-space version of the totally asymmetric simple exclusion process (TASEP), consisting of interacting Brownian particles subject to a driving force in a periodic external potential. Particles are inserted at the leftmost…

Statistical Mechanics · Physics 2010-02-02 Jose Eduardo de Oliveira Rodrigues , Ronald Dickman

In the effective mass approximation, electronic property in graphene can be characterized by the relativistic Dirac equation. Within such a continuum model we investigate the electronic transport through graphene waveguides formed by…

Strongly Correlated Electrons · Physics 2015-05-13 Haidong Li , Lin Wang , Zhihuan Lan , Yisong Zheng

Designing platforms to control phase-coherence and interference of electron waves is a cornerstone for future quantum electronics, computing or sensing. Nanoporous graphene (NPG) consisting of linked graphene nanoribbons has recently been…

Mesoscale and Nanoscale Physics · Physics 2019-11-07 Gaetano Calogero , Nick R. Papior , Bernhard Kretz , Aran Garcia-Lekue , Thomas Frederiksen , Mads Brandbyge

We argue that twisted graphene nanoribbons subjected to a transverse electric field can operate as a variety of nanoelectronic devices, such as tunable tunnel diodes with current-voltage characteristics controlled by the transverse field.…

Mesoscale and Nanoscale Physics · Physics 2018-12-14 Marta Saiz-Bretín , Andrey V. Malyshev , Francisco Domínguez-Adame

The low-energy spectrum of graphene nanoribbons with armchair edges (armchair nanoribbons) is described as the superposition of two non-equivalent Dirac points of graphene. In spite of the lack of well-separated two valley structures, the…

Mesoscale and Nanoscale Physics · Physics 2009-09-07 Masayuki Yamamoto , Yositake Takane , Katsunori Wakabayashi

The asymmetric simple exclusion process (ASEP) is an important model from statistical physics describing particles that hop randomly from one site to the next along an ordered lattice of sites, but only if the next site is empty. ASEP has…

Quantitative Methods · Quantitative Biology 2015-08-18 Alon Raveh , Yoram Zarai , Michael Margaliot , Tamir Tuller

We explore the stationary densities in totally asymmetric exclusion processes (TASEP) with open boundary conditions and spatially inhomogeneous hopping rates. We calculate the steady state density profiles that characterise the associated…

Statistical Mechanics · Physics 2024-10-31 Sudip Mukherjee , Abhik basu

We develop a mean-field theory for the totally asymmetric simple exclusion process (TASEP) with open boundaries, in order to investigate the so-called dynamical transition. The latter phenomenon appears as a singularity in the relaxation…

Statistical Mechanics · Physics 2020-08-11 Davide Botto , Alessandro Pelizzola , Marco Pretti , Marco Zamparo

Using Monte Carlo simulations and a domain wall theory, we discuss the effect of coupling several totally asymmetric simple exclusion processes (TASEPs) to a finite reservoir of particles. This simple model mimics directed biological…

Statistical Mechanics · Physics 2009-11-25 L. Jonathan Cook , R. K. P. Zia , B. Schmittmann