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Related papers: Quantum Techniques for Reaction Networks

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The spatially distributed reaction networks are indispensable for the understanding of many important phenomena concerning the development of organisms, coordinated cell behavior, and pattern formation. The purpose of this brief discussion…

Optimization and Control · Mathematics 2013-05-15 Marko Seslija , Jacquelien M. A. Scherpen , Arjan van der Schaft

Reaction networks are mathematical models of interacting chemical species that are primarily used in biochemistry. There are two modeling regimes that are typically used, one of which is deterministic and one that is stochastic. In…

Molecular Networks · Quantitative Biology 2018-09-14 David Anderson , Daniele Cappelletti

In an equilibrium chemical reaction mixture, the number of molecules present obeys a Poisson distribution. We ask when the same is true of the steady state of a nonequilibrium reaction network and obtain an essentially complete answer. In…

Statistical Mechanics · Physics 2013-05-29 David K. Lubensky

A detailed understanding of biochemical networks at the molecular level is essential for studying complex cellular processes. In this paper, we provide a comprehensive description of biochemical networks by considering individual atoms and…

Molecular Networks · Quantitative Biology 2025-04-08 Hadjar Rahou , Hulda S. Haraldsdottir , Filippo Martinelli , Ines Thiele , Ronan M. T. Fleming

The construction of a reaction network containing all relevant intermediates and elementary reactions is necessary for the accurate description of chemical processes. In the case of a complex chemical reaction (involving, for instance, many…

Chemical Physics · Physics 2017-12-19 Gregor N. Simm , Markus Reiher

Quantum network is an emerging type of network structure that leverages the principles of quantum mechanics to transmit and process information. Compared with classical data reconstruction algorithms, quantum networks make image…

Quantum Physics · Physics 2024-12-23 Xun Ji , Qin Liu , Shan Huang , Andi Chen , Shengjun Wu

In this work we present a general mathematical framework to deal with Quantum Networks, i.e. networks resulting from the interconnection of elementary quantum circuits. The cornerstone of our approach is a generalization of the Choi…

Quantum Physics · Physics 2016-01-20 Alessandro Bisio , Giulio Chiribella , Giacomo Mauro D'Ariano , Paolo Perinotti

Residual deep neural networks (ResNets) are mathematically described as interacting particle systems. In the case of infinitely many layers the ResNet leads to a system of coupled system of ordinary differential equations known as neural…

Analysis of PDEs · Mathematics 2022-05-11 M. Herty , A. Thuenen , T. Trimborn , G. Visconti

We present a novel method for identifying a biochemical reaction network based on multiple sets of estimated reaction rates in the corresponding reaction rate equations arriving from various (possibly different) experiments. The current…

Applications · Statistics 2008-10-06 Gheorghe Craciun , Casian Pantea , Grzegorz A. Rempala

By uncovering the contrast between Artificial Intelligence and Natural-born Intelligence as a computational process, we define closed computing and open computing, and implement open computing within chemical reactions. This involves…

Artificial Intelligence · Computer Science 2025-09-03 Yukio-Pegio Gunji , Andrew Adamatzky , Panagiotis Mougkogiannis , Andrei Khrenikov

Parameterized quantum circuits can be used as quantum neural networks and have the potential to outperform their classical counterparts when trained for addressing learning problems. To date, much of the results on their performance on…

Quantum Physics · Physics 2023-04-13 Junyu Liu , Khadijeh Najafi , Kunal Sharma , Francesco Tacchino , Liang Jiang , Antonio Mezzacapo

Internet-scale quantum repeater networks will be heterogeneous in physical technology, repeater functionality, and management. The classical control necessary to use the network will therefore face similar issues as Internet data…

Quantum Physics · Physics 2023-04-21 Rodney Van Meter , Joe Touch , Dominic Horsman

Networks are topological and geometric structures used to describe systems as different as the Internet, the brain or the quantum structure of space-time. Here we define complex quantum network geometries, describing the underlying…

Disordered Systems and Neural Networks · Physics 2015-09-02 Ginestra Bianconi , Christoph Rahmede , Zhihao Wu

The master equation describing non-equilibrium one-dimensional problems like diffusion limited reactions or critical dynamics of classical spin systems can be written as a Schr\"odinger equation in which the wave function is the probability…

High Energy Physics - Theory · Physics 2016-09-06 Francisco C. Alcaraz , Michel Droz , Malte Henkel , Vladimir Rittenberg

The development of chemical reaction models aids understanding and prediction in areas ranging from biology to electrochemistry and combustion. A systematic approach to building reaction network models uses observational data not only to…

Computational Engineering, Finance, and Science · Computer Science 2019-01-23 Nikhil Galagali , Youssef M. Marzouk

Organic reactions are usually assigned to classes containing reactions with similar reagents and mechanisms. Reaction classes facilitate the communication of complex concepts and efficient navigation through chemical reaction space.…

The use of mathematical methods for the analysis of chemical reaction systems has a very long history, and involves many types of models: deterministic versus stochastic, continuous versus discrete, and homogeneous versus spatially…

Molecular Networks · Quantitative Biology 2018-05-29 Polly Y. Yu , Gheorghe Craciun

A quantum network is an open system consisting of several component Markovian input-output subsystems interconnected by boson field channels carrying quantum stochastic signals. Generalizing the work of Chebotarev and Gregoratti, we…

Quantum Physics · Physics 2009-04-01 J. Gough , M. R. James

Quantum networks offer a realistic and practical scheme for generating multiparticle entanglement and implementing multiparticle quantum communication protocols. However, the correlations that can be generated in networks with quantum…

Quantum Physics · Physics 2023-08-29 Kiara Hansenne , Otfried Gühne

A chemical reaction network (CRN) is composed of reactions that can be seen as interactions among entities called species, which exist within the system. Endowed with kinetics, CRN has a corresponding set of ordinary differential equations…

Dynamical Systems · Mathematics 2021-04-20 Bryan S. Hernandez , Ralph John L. De la Cruz