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In recent years, manifold learning has become increasingly popular as a tool for performing non-linear dimensionality reduction. This has led to the development of numerous algorithms of varying degrees of complexity that aim to recover man…

Machine Learning · Statistics 2013-06-03 Dominique Perraul-Joncas , Marina Meila

Uniform Manifold Approximation and Projection (UMAP) is one of the state-of-the-art methods for dimensionality reduction and data visualization. This is a tutorial and survey paper on UMAP and its variants. We start with UMAP algorithm…

Human-Computer Interaction · Computer Science 2021-09-07 Benyamin Ghojogh , Ali Ghodsi , Fakhri Karray , Mark Crowley

We present an algorithm for approximating a function defined over a $d$-dimensional manifold utilizing only noisy function values at locations sampled from the manifold with noise. To produce the approximation we do not require any…

Machine Learning · Statistics 2020-08-13 Barak Sober , Yariv Aizenbud , David Levin

Isomap algorithm is a representative manifold learning algorithm. The algorithm simplifies the data analysis process and is widely used in neuroimaging, spectral analysis and other fields. However, the classic Isomap algorithm becomes…

Quantum Physics · Physics 2022-12-08 WeiJun Feng , GongDe Guo , Kai Yu , Xin Zhang , Song Lin

We use tools from geometric statistics to analyze the usual estimation procedure of a template shape. This applies to shapes from landmarks, curves, surfaces, images etc. We demonstrate the asymptotic bias of the template shape estimation…

Computer Vision and Pattern Recognition · Computer Science 2017-02-03 Nina Miolane , Susan Holmes , Xavier Pennec

A central part of geometric statistics is to compute the Fr\'echet mean. This is a well-known intrinsic mean on a Riemannian manifold that minimizes the sum of squared Riemannian distances from the mean point to all other data points. The…

Machine Learning · Statistics 2025-11-07 Frederik Möbius Rygaard , Søren Hauberg , Steen Markvorsen

Data-sensitive metrics adapt distances locally based the density of data points with the goal of aligning distances and some notion of similarity. In this paper, we give the first exact algorithm for computing a data-sensitive metric called…

Computational Geometry · Computer Science 2020-04-22 Timothy Chu , Gary Miller , Donald Sheehy

We propose an algorithm to estimate the topology of an embedded metric graph from a well-sampled finite subset of the underlying graph.

Computational Geometry · Computer Science 2019-12-09 Brittany Terese Fasy , Rafal Komendarczyk , Sushovan Majhi , Carola Wenk

A suitable measure for the similarity of shapes represented by parameterized curves or surfaces is the Fr\'echet distance. Whereas efficient algorithms are known for computing the Fr\'echet distance of polygonal curves, the same problem for…

Computational Geometry · Computer Science 2007-05-23 Helmut Alt , Maike Buchin

This paper shows how to use the shooting method, a classical numerical algorithm for solving boundary value problems, to compute the Riemannian distance on the Stiefel manifold $ \mathrm{St}(n,p) $, the set of $ n \times p $ matrices with…

Numerical Analysis · Mathematics 2024-07-09 Marco Sutti

Manifolds discovered by machine learning models provide a compact representation of the underlying data. Geodesics on these manifolds define locally length-minimising curves and provide a notion of distance, which are key for reduced-order…

Machine Learning · Computer Science 2023-05-25 Daniel Kelshaw , Luca Magri

Let $\XX$ be a compact, smooth, connected, Riemannian manifold without boundary, $G:\XX\times\XX\to \RR$ be a kernel. Analogous to a radial basis function network, an eignet is an expression of the form $\sum_{j=1}^M a_jG(\circ,y_j)$, where…

Machine Learning · Computer Science 2009-09-29 H. N. Mhaskar

We introduce new distance measures for comparing straight-line embedded graphs based on the Fr\'echet distance and the weak Fr\'echet distance. These graph distances are defined using continuous mappings and thus take the combinatorial…

Computational Geometry · Computer Science 2019-09-12 Hugo A. Akitaya , Maike Buchin , Bernhard Kilgus , Stef Sijben , Carola Wenk

The Fr\'echet distance is a popular similarity measure that is well-understood for polygonal curves in $\mathbb{R}^d$: near-quadratic time algorithms exist, and conditional lower bounds suggest that these results cannot be improved…

Computational Geometry · Computer Science 2025-05-09 Thijs van der Horst , Marc van Kreveld , Tim Ophelders , Bettina Speckmann

The existing approaches to intrinsic dimension estimation usually are not reliable when the data are nonlinearly embedded in the high dimensional space. In this work, we show that the explicit accounting to geometric properties of unknown…

Machine Learning · Statistics 2019-04-15 Marina Gomtsyan , Nikita Mokrov , Maxim Panov , Yury Yanovich

The real symplectic Stiefel manifold is the manifold of symplectic bases of symplectic subspaces of a fixed dimension. It features in a large variety of applications in physics and engineering. In this work, we study this manifold with the…

Differential Geometry · Mathematics 2021-08-31 Thomas Bendokat , Ralf Zimmermann

Deep generative models are tremendously successful in learning low-dimensional latent representations that well-describe the data. These representations, however, tend to much distort relationships between points, i.e. pairwise distances…

Machine Learning · Computer Science 2018-09-14 Tao Yang , Georgios Arvanitidis , Dongmei Fu , Xiaogang Li , Søren Hauberg

This paper proposes an original Riemmanian geometry for low-rank structured elliptical models, i.e., when samples are elliptically distributed with a covariance matrix that has a low-rank plus identity structure. The considered geometry is…

Differential Geometry · Mathematics 2020-01-07 Florent Bouchard , Arnaud Breloy , Guillaume Ginolhac , Alexandre Renaux , Frédéric Pascal

A key problem in approximation theory is the recovery of high-dimensional functions from samples. In many cases, the functions of interest exhibit anisotropic smoothness, and, in many practical settings, the nature of this anisotropy may be…

Numerical Analysis · Mathematics 2026-04-10 Ben Adcock , Avi Gupta

We consider the problem of recovering a $d-$dimensional manifold $\mathcal{M} \subset \mathbb{R}^n$ when provided with noiseless samples from $\mathcal{M}$. There are many algorithms (e.g., Isomap) that are used in practice to fit manifolds…

Statistics Theory · Mathematics 2017-09-13 Kitty Mohammed , Hariharan Narayanan