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We introduce a new method to estimate the Markov equivalence class of a directed acyclic graph (DAG) in the presence of hidden variables, in settings where the underlying DAG among the observed variables is sparse, and there are a few…

Methodology · Statistics 2018-08-07 Benjamin Frot , Preetam Nandy , Marloes H. Maathuis

An algorithm for generating the structure of a directed acyclic graph from data using the notion of causal input lists is presented. The algorithm manipulates the ordering of the variables with operations which very much resemble arc…

Artificial Intelligence · Computer Science 2013-03-25 Remco R. Bouckaert

The PC and FCI algorithms are popular constraint-based methods for learning the structure of directed acyclic graphs (DAGs) in the absence and presence of latent and selection variables, respectively. These algorithms (and their…

Methodology · Statistics 2022-03-14 Shubhadeep Chakraborty , Ali Shojaie

Inferring the potential consequences of an unobserved event is a fundamental scientific question. To this end, Pearl's celebrated do-calculus provides a set of inference rules to derive an interventional probability from an observational…

Discrete Mathematics · Computer Science 2021-08-10 Benjamin Heymann , Michel de Lara , Jean-Philippe Chancelier

Observational studies in fields such as epidemiology often rely on covariate adjustment to estimate causal effects. Classical graphical criteria, like the back-door criterion and the generalized adjustment criterion, are powerful tools for…

Methodology · Statistics 2025-12-24 Isabela Belciug , Simon Ferreira , Charles K. Assaad

This article surveys the variety of ways in which a directed acyclic graph (DAG) can be used to represent a problem of probabilistic causality. For each of these we describe the relevant formal or informal semantics governing that…

Statistics Theory · Mathematics 2024-02-16 Philip Dawid

We consider the problem of learning causal directed acyclic graphs from an observational joint distribution. One can use these graphs to predict the outcome of interventional experiments, from which data are often not available. We show…

Machine Learning · Statistics 2016-08-18 Jonas Peters , Joris Mooij , Dominik Janzing , Bernhard Schölkopf

A structural equation model (SEM) is an effective framework to reason over causal relationships represented via a directed acyclic graph (DAG). Recent advances have enabled effective maximum-likelihood point estimation of DAGs from…

Machine Learning · Computer Science 2021-12-07 Chris Cundy , Aditya Grover , Stefano Ermon

Differences-in-differences (DiD) is a causal inference method for observational longitudinal data that assumes parallel expected potential outcome trajectories between treatment groups under the counterfactual scenario where all units…

Methodology · Statistics 2026-05-12 Michael Jetsupphasuk , Didong Li , Michael G. Hudgens

Causal structure learning has long been the central task of inferring causal insights from data. Despite the abundance of real-world processes exhibiting higher-order mechanisms, however, an explicit treatment of interactions in causal…

Machine Learning · Computer Science 2025-11-07 James Enouen , Yujia Zheng , Ignavier Ng , Yan Liu , Kun Zhang

Dependency knowledge of the form "x is independent of y once z is known" invariably obeys the four graphoid axioms, examples include probabilistic and database dependencies. Often, such knowledge can be represented efficiently with…

Artificial Intelligence · Computer Science 2013-04-10 Tom S. Verma , Judea Pearl

The subject of this paper is the elucidation of effects of actions from causal assumptions represented as a directed graph, and statistical knowledge given as a probability distribution. In particular, we are interested in predicting…

Artificial Intelligence · Computer Science 2012-07-02 Ilya Shpitser , Judea Pearl

We consider the problem of identifying intermediate variables (or mediators) that regulate the effect of a treatment on a response variable. While there has been significant research on this classical topic, little work has been done when…

Methodology · Statistics 2021-07-29 Abhishek Chakrabortty , Preetam Nandy , Hongzhe Li

We present a graphical approach to deriving inequality constraints for directed acyclic graph (DAG) models, where some variables are unobserved. In particular we show that the observed distribution of a discrete model is always restricted…

Statistics Theory · Mathematics 2012-09-14 Robin J. Evans

Discovering causal structures from multivariate time series is a key problem because interactions span across multiple lags and possibly involve instantaneous dependencies. Additionally, the search space of the dynamic graphs is…

Machine Learning · Computer Science 2026-05-19 Sourajit Das , Dibyajyoti Chakraborty , Romit Maulik

We consider distributions arising from a mixture of causal models, where each model is represented by a directed acyclic graph (DAG). We provide a graphical representation of such mixture distributions and prove that this representation…

Machine Learning · Statistics 2020-08-11 Basil Saeed , Snigdha Panigrahi , Caroline Uhler

Precise knowledge of causal directed acyclic graphs (DAGs) is assumed for standard approaches towards valid adjustment set selection for unbiased estimation, but in practice, the DAG is often inferred from data or expert knowledge,…

Statistics Theory · Mathematics 2025-11-14 Zhongyi Hu , Stéphanie van der Pas

Estimating the structure of Bayesian networks as directed acyclic graphs (DAGs) from observational data is a fundamental challenge, particularly in causal discovery. Bayesian approaches excel by quantifying uncertainty and addressing…

Machine Learning · Computer Science 2026-02-17 Edwin V. Bonilla , Pantelis Elinas , He Zhao , Maurizio Filippone , Vassili Kitsios , Terry O'Kane

New biological assays like Perturb-seq link highly parallel CRISPR interventions to a high-dimensional transcriptomic readout, providing insight into gene regulatory networks. Causal gene regulatory networks can be represented by directed…

Machine Learning · Statistics 2024-02-22 Albert Xue , Jingyou Rao , Sriram Sankararaman , Harold Pimentel

This paper considers the problem of estimating the unknown intervention targets in a causal directed acyclic graph from observational and interventional data. The focus is on soft interventions in linear structural equation models (SEMs).…

Methodology · Statistics 2021-11-16 Burak Varici , Karthikeyan Shanmugam , Prasanna Sattigeri , Ali Tajer
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