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We solve the problem of minimizing the number of critical points among all functions on a surface within a prescribed distance {\delta} from a given input function. The result is achieved by establishing a connection between discrete Morse…

Computational Geometry · Computer Science 2015-05-07 Ulrich Bauer , Carsten Lange , Max Wardetzky

This paper brings together three distinct theories with the goal of quantifying shape textures with complex morphologies. Distance fields are central objects in shape representation, while topological data analysis uses algebraic topology…

Algebraic Topology · Mathematics 2023-07-04 Anna Song , Ka Man Yim , Anthea Monod

Recently, multi-scale notions of local homology (a variant of persistent homology) have been used to study the local structure of spaces around a given point from a point cloud sample. Current reconstruction guarantees rely on constructing…

Computational Geometry · Computer Science 2013-04-24 Primoz Skraba , Bei Wang

In Persistent Homology and Topology, filtrations are usually given by introducing an ordered collection of sets or a continuous function from a topological space to $\R^n$. A natural question arises, whether these approaches are equivalent…

General Topology · Mathematics 2013-04-05 Barbara Di Fabio , Patrizio Frosini

The problem of embedding a set of objects into a low-dimensional Euclidean space based on a matrix of pairwise dissimilarities is fundamental in data analysis, machine learning, and statistics. However, the assumptions of many standard…

Computational Geometry · Computer Science 2025-08-21 Omid Arhami , Pejman Rohani

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

Machine Learning · Computer Science 2024-12-20 Rubén Ballester , Bastian Rieck

Topological Data Analysis (TDA) is a rising field of computational topology in which the topological structure of a data set can be observed by persistent homology. By considering a sequence of sublevel sets, one obtains a filtration that…

Methodology · Statistics 2020-03-17 Yu-Min Chung , William Cruse , Austin Lawson

This paper introduces persistent homology, which is a powerful tool to characterize the shape of data using the mathematical concept of topology. We explain the fundamental idea of persistent homology from scratch using some examples. We…

Algebraic Topology · Mathematics 2022-05-25 Ippei Obayashi , Takenobu Nakamura , Yasuaki Hiraoka

We propose a functorial framework for persistent homology based on finite topological spaces and their associated posets. Starting from a finite metric space, we associate a filtration of finite topologies whose structure maps are…

Algebraic Topology · Mathematics 2026-02-24 Selçuk Kayacan

Topological methods, including persistent homology, are powerful tools for analysis of high-dimensional data sets but these methods rely almost exclusively on thresholding techniques. In noisy data sets, thresholding does not always allow…

Computational Geometry · Computer Science 2016-09-08 Jennifer Kloke , Gunnar Carlsson

Interacting, self-propelled particles such as epithelial cells can dynamically self-organize into complex multicellular patterns, which are challenging to classify without a priori information. Classically, different phases and phase…

Quantitative Methods · Quantitative Biology 2021-01-19 Dhananjay Bhaskar , William Y. Zhang , Ian Y. Wong

In this paper we present an efficient algorithm to produce a provably dense sample of a smooth compact variety. The procedure is partly based on computing $\textit{bottlenecks}$ of the variety. Using geometric information such as the…

Algebraic Geometry · Mathematics 2020-10-19 Sandra Di Rocco , David Eklund , Oliver Gäfvert

A common problem in the optimization of structures is the handling of uncertainties in the parameters. If the parameters appear in the constraints, the uncertainties can lead to an infinite number of constraints. Usually the constraints…

Optimization and Control · Mathematics 2012-05-01 Daniel P. Mohr , Ina Stein , Thomas Matzies , Christina A. Knapek

Capturing the dynamics of active particles, i.e., small self-propelled agents that both deform and are deformed by a fluid in which they move is a formidable problem as it requires coupling fine scale hydrodynamics with large scale…

Soft Condensed Matter · Physics 2025-09-09 Sadra Saremi , Amirhossein Ahmadkhan Kordbacheh

We use the notion of topological data analysis to compare metrics on data sets. We provide two different motivating examples for this. The first of these is a point cloud data set that has $\mathbb{R}^2$ as its ambient space, and is…

General Topology · Mathematics 2015-03-17 Scott Balchin , Etienne Pillin

We present a new tool for data analysis: persistence discrete homology, which is well-suited to analyze filtrations of graphs. In particular, we provide a novel way of representing high-dimensional data as a filtration of graphs using…

Algebraic Topology · Mathematics 2025-06-23 Chris Kapulkin , Nathan Kershaw

We provide upper bounds of the expected Wasserstein distance between a probability measure and its empirical version, generalizing recent results for finite dimensional Euclidean spaces and bounded functional spaces. Such a generalization…

Statistics Theory · Mathematics 2020-01-29 Jing Lei

The interaction between discrete and continuous mathematics lies at the heart of many fundamental problems in applied mathematics and computational sciences. In this paper we discuss the problem of discretizing vector-valued functions…

Numerical Analysis · Mathematics 2020-05-29 Paweł Dłotko , Thomas Wanner

Multidimensional Projection is a fundamental tool for high-dimensional data analytics and visualization. With very few exceptions, projection techniques are designed to map data from a high-dimensional space to a visual space so as to…

Graphics · Computer Science 2020-09-04 Harish Doraiswamy , Julien Tierny , Paulo J. S. Silva , Luis Gustavo Nonato , Claudio Silva

In topological data analysis, persistent homology is used to study the "shape of data". Persistent homology computations are completely characterized by a set of intervals called a bar code. It is often said that the long intervals…

Computational Geometry · Computer Science 2025-02-19 Peter Bubenik , Michael Hull , Dhruv Patel , Benjamin Whittle