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Pattern-based, modular ontologies have several beneficial properties that lend themselves to FAIR data practices, especially as it pertains to Interoperability and Reusability. However, developing such ontologies has a high upfront cost,…

Artificial Intelligence · Computer Science 2019-04-12 Cogan Shimizu , Quinn Hirt , Pascal Hitzler

The Internet of Things movement provides self-configuring and universally interoperable devices. While such devices are often built with a specific application in mind, they often turn out to be useful in other contexts as well. We claim…

Databases · Computer Science 2014-03-03 Henning Hasemann , Alexander Kröller , Max Pagel

Provenance has been thought of a mechanism to verify a workflow and to provide workflow reproducibility. This provenance of scientific workflows has been effectively carried out in Grid based scientific workflow systems. However, recent…

Databases · Computer Science 2015-12-01 Khawar Hasham , Kamran Munir , Richard McClatchey

Exponential growth in digital information outlets and the race to publish has made scientific misinformation more prevalent than ever. However, the task to fact-verify a given scientific claim is not straightforward even for researchers.…

Computation and Language · Computer Science 2022-04-19 Ashish Rana , Deepanshu Khanna , Tirthankar Ghosal , Muskaan Singh , Harpreet Singh , Prashant Singh Rana

The rapid growth of interest in large language models (LLMs) reflects their potential for flexibility and generalization, and attracted the attention of a diverse range of researchers. However, the advent of these techniques has also…

Machine Learning · Computer Science 2025-07-03 Gabriele Padovani , Valentine Anantharaj , Sandro Fiore

Increasingly massive volumes of multi-modal data are being accumulated in many {real world} settings, including in health care and e-commerce. This development calls for effective general-purpose data management solutions for multi-modal…

Databases · Computer Science 2025-07-08 Tang Qian , Yifan Zhu , Lu Chen , Xiangyu Ke , Jingwen Zhao , Tianyi Li , Yunjun Gao , Christian S. Jensen

Provenance metadata can be valuable in data sharing settings, where it can be used to help data consumers form judgements regarding the reliability of the data produced by third parties. However, some parts of provenance may be sensitive,…

Databases · Computer Science 2014-06-10 Paolo Missier , Jeremy Bryans , Carl Gamble , Vasa Curcin , Roxana Danger

Science is conducted collaboratively, often requiring the sharing of knowledge about computational experiments. When experiments include only datasets, they can be shared using Uniform Resource Identifiers (URIs) or Digital Object…

Databases · Computer Science 2018-06-19 Zhihao Yuan , Dai Hai Ton That , Siddhant Kothari , Gabriel Fils , Tanu Malik

Accurately and consistently indexing biomedical literature by publication type and study design is essential for supporting evidence synthesis and knowledge discovery. Prior work on automated publication type and study design indexing has…

Computation and Language · Computer Science 2026-05-13 Shufan Ming , Joe D. Menke , Neil R. Smalheiser , Halil Kilicoglu

Reproducibility of research is essential for science. However, in the way modern computational biology research is done, it is easy to lose track of small, but extremely critical, details. Key details, such as the specific version of a…

Capturing the history of operations and activities during a computational workflow is significantly important for Earth Observation (EO). The data provenance helps to collect the metadata that records the lineage of data products, providing…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-11 H. Omidi , L. Sacco , V. Hutter , G. Irsiegler , M. Claus , M. Schobben , A. Jacob , M. Schramm , S. Fiore

The emerging Web of Data utilizes the web infrastructure to represent and interrelate data. The foundational standards of the Web of Data include the Uniform Resource Identifier (URI) and the Resource Description Framework (RDF). URIs are…

Artificial Intelligence · Computer Science 2011-08-05 Marko A. Rodriguez

Like other types of computational research, modeling and simulation of biological processes (biomodels) is still largely communicated without sufficient detail to allow independent reproduction of results. But reproducibility in this area…

Other Quantitative Biology · Quantitative Biology 2023-04-19 Pedro Mendes

An essential part of research and scientific communication is researchers' ability to reproduce the results of others. While there have been increasing standards for authors to make data and code available, many of these files are hard to…

Digital Libraries · Computer Science 2021-09-23 Layan Bahaidarah , Ethan Hung , Andreas F. De Melo Oliveira , Jyotsna Penumaka , Lukas Rosario , Ana Trisovic

Provenance systems are used to capture history metadata, applications include ownership attribution and determining the quality of a particular data set. Provenance systems are also used for debugging, process improvement, understanding…

Cryptography and Security · Computer Science 2017-05-19 Oluwakemi Hambolu , Lu Yu , Jon Oakley , Richard R. Brooks , Ujan Mukhopadhyay , Anthony Skjellum

Crowdsourcing is a multidisciplinary research area including disciplines like artificial intelligence, human-computer interaction, database, and social science. To facilitate cooperation across disciplines, reproducibility is a crucial…

Databases · Computer Science 2016-09-06 Ruochen Jiang , Jiannan Wang

The metadata about scientific experiments published in online repositories have been shown to suffer from a high degree of representational heterogeneity---there are often many ways to represent the same type of information, such as a…

Computation and Language · Computer Science 2020-12-17 Rafael S. Gonçalves , Maulik R. Kamdar , Mark A. Musen

Machine Learning models are deployed across a wide range of industries, performing a wide range of tasks. Tracking these models and ensuring they behave appropriately is becoming increasingly difficult as the number of deployed models…

Machine Learning · Computer Science 2021-10-08 Adam Pocock

With the rapidly increasing amount of scientific literature,it is getting continuously more difficult for researchers in different disciplines to be updated with the recent findings in their field of study.Processing scientific articles in…

Digital Libraries · Computer Science 2022-03-04 Cristina-Iulia Bucur , Tobias Kuhn , Davide Ceolin , Jacco van Ossenbruggen

Research in Computational Linguistics is dependent on text corpora for training and testing new tools and methodologies. While there exists a plethora of annotated linguistic information, these corpora are often not interoperable without…

Computation and Language · Computer Science 2020-11-03 Timo Lek , Anna de Groot , Tobias Kuhn , Roser Morante