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Related papers: Persistent Homology of Delay Embeddings

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Delay tomography has so far burdened source and receiver measurement nodes in a network with two requirements such as path establishment and clock synchronization between them. In this letter, we focus on the clock synchronization problem…

Networking and Internet Architecture · Computer Science 2014-02-24 Kensuke Nakanishi , Shinsuke Hara , Takahiro Matsuda , Kenichi Takizawa , Fumie Ono , Ryu Miura

This paper introduces an unsupervised method to estimate the class separability of text datasets from a topological point of view. Using persistent homology, we demonstrate how tracking the evolution of embedding manifolds during training…

Machine Learning · Computer Science 2024-06-19 Kostis Gourgoulias , Najah Ghalyan , Maxime Labonne , Yash Satsangi , Sean Moran , Joseph Sabelja

This paper proposes a novel approach for detecting the topology of distribution networks based on the analysis of time series measurements. The time-based analysis approach draws on data from high-precision phasor measurement units (PMUs or…

Systems and Control · Computer Science 2015-04-23 Guido Cavraro , Reza Arghandeh , Alexandra von Meier

Persistent homology is a topological feature used in a variety of applications such as generating features for data analysis and penalizing optimization problems. We develop an approach to accelerate persistent homology computations…

Algebraic Topology · Mathematics 2023-01-19 Yuan Luo , Bradley J. Nelson

Persistent homology is an effective method for extracting topological information, represented as persistent diagrams, of spatial structure data. Hence it is well-suited for the study of protein structures. Attempts to incorporate…

Machine Learning · Computer Science 2024-08-01 An Wu , Yu Pan , Fuqi Zhou , Jinghui Yan , Chuanlu Liu

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

Algebraic Topology · Mathematics 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

The conventional non-coherent differential detection of continuous phase modulation (CPM) is quite robust to channel impairments such as phase and Doppler shifts. Its implementation is on top of that simple. It consists in multiplying the…

Information Theory · Computer Science 2022-04-13 Anouar Jerbi , Karine Amis , Frédéric Guilloud , Tarik Benaddi

We demonstrate how to use persistent homology for cosmological parameter inference in a tomographic cosmic shear survey. We obtain the first cosmological parameter constraints from persistent homology by applying our method to the…

Cosmology and Nongalactic Astrophysics · Physics 2022-11-16 Sven Heydenreich , Benjamin Brück , Pierre Burger , Joachim Harnois-Déraps , Sandra Unruh , Tiago Castro , Klaus Dolag , Nicolas Martinet

In this work, we introduce persistent homology for the analysis of cryo-electron microscopy (cryo-EM) density maps. We identify the topological fingerprint or topological signature of noise, which is widespread in cryo-EM data. For low…

Biomolecules · Quantitative Biology 2014-12-09 Kelin Xia , Guo-Wei Wei

We introduce harmonization, an ensembling method that combines several "noisy" decoders to generate highly accurate decoding predictions. Harmonized ensembles of MWPM-based decoders achieve lower logical error rates than their individual…

Quantum Physics · Physics 2024-03-18 Noah Shutty , Michael Newman , Benjamin Villalonga

This paper contains an expository account of persistent homology and its usefulness for topological data analysis. An alternative foundation for level-set persistence is presented using sheaves and cosheaves.

Algebraic Topology · Mathematics 2015-03-05 Justin Curry

In a system of many similar self-propelled entities such as flocks of birds, fish school, cells and molecules, the interactions with neighbors can lead to a "coherent state", meaning the formation of visually compelling aggregation patterns…

Applications · Statistics 2024-03-07 Thevasha Sathiyakumar , Shantanu Sur , Sumona Mondal , Marko Budišić

We study systems of identical coupled oscillators introducing a distribution of delay times in the coupling. For arbitrary network topologies, we show that the frequency and stability of the fully synchronized states depend only on the mean…

Chaotic Dynamics · Physics 2016-07-04 Lucas Wetzel , Luis G. Morelli , Andrew C. Oates , Frank Julicher , Saul Ares

Persistent Homology is a fairly new branch of Computational Topology which combines geometry and topology for an effective shape description of use in Pattern Recognition. In particular it registers through "Betti Numbers" the presence of…

Quantitative Methods · Quantitative Biology 2016-06-01 Massimo Ferri , Ivan Tomba , Andrea Visotti , Ignazio Stanganelli

Hypergraph data appear and are hidden in many places in the modern age. They are data structure that can be used to model many real data examples since their structures contain information about higher order relations among data points. One…

Social and Information Networks · Computer Science 2020-10-02 Dong Quan Ngoc Nguyen , Lin Xing , Lizhen Lin

We introduce and test several novel approaches for periodicity detection in unevenly-spaced sparse datasets. Specifically, we examine five different kinds of periodicity metrics, which are based on non-parametric measures of serial…

Instrumentation and Methods for Astrophysics · Physics 2016-01-07 Shay Zucker

Phase separation mechanisms can produce a variety of complicated and intricate microstructures, which often can be difficult to characterize in a quantitative way. In recent years, a number of novel topological metrics for microstructures…

Numerical Analysis · Mathematics 2020-05-29 Paweł Dłotko , Thomas Wanner

Detecting the dimension of a hidden manifold from a point sample has become an important problem in the current data-driven era. Indeed, estimating the shape dimension is often the first step in studying the processes or phenomena…

Computational Geometry · Computer Science 2014-05-15 Tamal K. Dey , Fengtao Fan , Yusu Wang

This work presents a new method to quantify connectivity in transportation networks. Inspired by the field of topological data analysis, we propose a novel approach to explore the robustness of road network connectivity in the presence of…

In this article we propose a novel approach for comparing the persistent homology representations of two spaces (filtrations). Commonly used methods are based on numerical summaries such as persistence diagrams and persistence landscapes,…

Machine Learning · Computer Science 2021-01-05 Yohai Reani , Omer Bobrowski