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We describe an algorithm computing an optimal prefix free code for $n$ unsorted positive weights in time within $O(n(1+\lg \alpha))\subseteq O(n\lg n)$, where the alternation $\alpha\in[1..n-1]$ measures the amount of sorting required by…

Data Structures and Algorithms · Computer Science 2016-02-02 Jérémy Barbay

This article presents the PaSTiLa algorithm for automated labeling of large time series on a cluster with GPUs. The method automatically selects snippet length values based on the new proposed criterion and allows to search for patterns…

Databases · Computer Science 2024-01-26 Andrey Goglachev

In this short note we present a comprehensive bibliography for the online exact string matching problem. The problem consists in finding all occurrences of a given pattern in a text. It is an extensively studied problem in computer science,…

Data Structures and Algorithms · Computer Science 2016-05-18 Simone Faro

We consider low-space algorithms for the classic Element Distinctness problem: given an array of $n$ input integers with $O(\log n)$ bit-length, decide whether or not all elements are pairwise distinct. Beame, Clifford, and Machmouchi [FOCS…

Data Structures and Algorithms · Computer Science 2021-11-03 Lijie Chen , Ce Jin , R. Ryan Williams , Hongxun Wu

We introduce a new string matching problem called order-preserving matching on numeric strings where a pattern matches a text if the text contains a substring whose relative orders coincide with those of the pattern. Order-preserving…

Data Structures and Algorithms · Computer Science 2013-02-19 Jinil Kim , Peter Eades , Rudolf Fleischer , Seok-Hee Hong , Costas S. Iliopoulos , Kunsoo Park , Simon J. Puglisi , Takeshi Tokuyama

A palindrome is a string that reads the same forward and backward. A palindromic substring $w$ of a string $T$ is called a minimal unique palindromic substring (MUPS) of $T$ if $w$ occurs only once in $T$ and any proper palindromic…

Data Structures and Algorithms · Computer Science 2021-10-05 Mitsuru Funakoshi , Takuya Mieno

Classic algorithms and machine learning systems like neural networks are both abundant in everyday life. While classic computer science algorithms are suitable for precise execution of exactly defined tasks such as finding the shortest path…

Machine Learning · Computer Science 2022-09-02 Felix Petersen

We present two algorithms for maintaining the topological order of a directed acyclic graph with n vertices, under an online edge insertion sequence of m edges. Efficient algorithms for online topological ordering have many applications,…

Data Structures and Algorithms · Computer Science 2007-11-05 Telikepalli Kavitha , Rogers Mathew

The fragile complexity of a comparison-based algorithm is $f(n)$ if each input element participates in $O(f(n))$ comparisons. In this paper, we explore the fragile complexity of algorithms adaptive to various restrictions on the input,…

Data Structures and Algorithms · Computer Science 2021-02-02 Prosenjit Bose , Pilar Cano , Rolf Fagerberg , John Iacono , Riko Jacob , Stefan Langerman

We present an algorithm that enumerates all the minimal triangulations of a graph in incremental polynomial time. Consequently, we get an algorithm for enumerating all the proper tree decompositions, in incremental polynomial time, where…

Data Structures and Algorithms · Computer Science 2023-07-28 Nofar Carmeli , Batya Kenig , Benny Kimelfeld , Markus Kröll

We consider the problem of estimating the number of distinct elements in a large data set (or, equivalently, the support size of the distribution induced by the data set) from a random sample of its elements. The problem occurs in many…

Machine Learning · Computer Science 2021-06-17 Talya Eden , Piotr Indyk , Shyam Narayanan , Ronitt Rubinfeld , Sandeep Silwal , Tal Wagner

Although many authors have considered how many ternary comparisons it takes to sort a multiset $S$ of size $n$, the best known upper and lower bounds still differ by a term linear in $n$. In this paper we restrict our attention to online…

Data Structures and Algorithms · Computer Science 2009-07-07 Travis Gagie , Yakov Nekrich

A palindrome is a string that reads the same as its reverse, such as "aibohphobia" (fear of palindromes). Given an integer $d>0$, a $d$-near-palindrome is a string of Hamming distance at most $d$ from its reverse. We study the natural…

Data Structures and Algorithms · Computer Science 2017-05-05 Elena Grigorescu , Erfan Sadeqi Azer , Samson Zhou

Palindromes are non-empty strings that read the same forward and backward. The problem of recognizing strings that can be represented as the concatenation of even-length palindromes, the concatenation of palindromes of length at least two,…

Data Structures and Algorithms · Computer Science 2025-04-18 Gabriel Bathie , Jonas Ellert , Tatiana Starikovskaya

We study variable time search, a form of quantum search where queries to different items take different time. Our first result is a new quantum algorithm that performs variable time search with complexity $O(\sqrt{T}\log n)$ where…

Quantum Physics · Physics 2023-08-04 Andris Ambainis , Martins Kokainis , Jevgēnijs Vihrovs

The order-preserving model (op-model, in short) was introduced quite recently but has already attracted significant attention because of its applications in data analysis. We introduce several types of periods in this setting (op-periods).…

Data Structures and Algorithms · Computer Science 2018-01-08 Garance Gourdel , Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Arseny Shur , Tomasz Waleń

Grouping elements into families to analyse them separately is a standard analysis procedure in many areas of sciences. We propose herein a new algorithm based on the simple idea that members from a family look like each other, and don't…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Axel Descamps , Sélène Forget , Aliénor Lahlou , Claire Lavergne , Camille Berthelot , Guillaume Stirnemann , Rodolphe Vuilleumier , Nicolas Chéron

We address the problem of building an index for a set $D$ of $n$ strings, where each string location is a subset of some finite integer alphabet of size $\sigma$, so that we can answer efficiently if a given simple query string (where each…

Formal Languages and Automata Theory · Computer Science 2010-10-04 Kimmo Fredriksson

The dictionary matching with gaps problem is to preprocess a dictionary $D$ of $d$ gapped patterns $P_1,\ldots,P_d$ over alphabet $\Sigma$, where each gapped pattern $P_i$ is a sequence of subpatterns separated by bounded sequences of don't…

Data Structures and Algorithms · Computer Science 2014-08-12 Amihood Amir , Avivit Levy , Ely Porat , B. Riva Shalom

A seed in a word is a relaxed version of a period in which the occurrences of the repeating subword may overlap. We show a linear-time algorithm computing a linear-size representation of all the seeds of a word (the number of seeds might be…

Data Structures and Algorithms · Computer Science 2019-03-15 Tomasz Kociumaka , Marcin Kubica , Jakub Radoszewski , Wojciech Rytter , Tomasz Walen