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We model biochemical signal transduction, based on a ligand-receptor binding mechanism, as a discrete-time finite-state Markov channel, which we call the BIND channel. We show how to obtain the capacity of this channel, for the case of…

Molecular Networks · Quantitative Biology 2016-11-15 Peter J. Thomas , Andrew W. Eckford

In this paper, diffusion-based molecular commu- nication with ligand receptor receivers is studied. Information messages are assumed to be encoded via variations of the con- centration of molecules. The randomness in the ligand reception…

Information Theory · Computer Science 2015-11-10 Mehrdad Tahmasbi , Faramarz Fekri

In diffusion-based molecular communications, messages can be conveyed via the variation in the concentration of molecules in the medium. In this paper, we intend to analyze the achievable capacity in transmission of information from one…

Information Theory · Computer Science 2011-05-11 Arash Einolghozati , Mohsen Sardari , Ahmad Beirami , Faramarz Fekri

In this paper, we consider the bacterial point-to-point communication problem with one transmitter and one receiver by considering the ligand receptor binding process. The most commonly investigated signalling model, referred to as the…

Information Theory · Computer Science 2015-04-17 Gholamali Aminian , Mahtab Mirmohseni , Masoumeh Nasiri Kenari , Faramarz Fekri

A diffusion-based molecular communication system has two major components: the diffusion in the medium, and the ligand-reception. Information bits, encoded in the time variations of the concentration of molecules, are conveyed to the…

Information Theory · Computer Science 2012-05-23 Arash Einolghozati , Mohsen Sardari , Faramarz Fekri

Biological systems transduce signals from their surroundings through a myriad of pathways. In this paper, we describe signal transduction as a communication system: the signal transduction receptor acts as the receiver in this system, and…

Information Theory · Computer Science 2019-01-25 Andrew W. Eckford , Peter J. Thomas

We introduce a general framework for treating channels with memory and feedback. First, we generalize Massey's concept of directed information and use it to characterize the feedback capacity of general channels. Second, we present coding…

Information Theory · Computer Science 2007-07-13 Sekhar Tatikonda , Sanjoy Mitter

We investigate how to exploit intermittent feedback for interference management. Focusing on the two-user linear deterministic interference channel, we completely characterize the capacity region. We find that the characterization only…

Information Theory · Computer Science 2016-11-17 Can Karakus , I-Hsiang Wang , Suhas Diggavi

The capacity of time-varying channels with periodic feedback at the transmitter is evaluated. It is assumed that the channel state information is perfectly known at the receiver and is fed back to the transmitter at the regular…

Information Theory · Computer Science 2007-07-13 Mehdi Ansari Sadrabadi , Mohammad Ali Maddah-Ali , Amir K. Khandani

In this paper, the capacity of a diffusion based molecular communication network under the model of a Linear Time Invarient-Poisson (LTI-Poisson) channel is studied. Introduced in the context of molecular communication, the LTI-Poisson…

Information Theory · Computer Science 2014-10-17 Hamidreza Arjmandi , Gholamali Aminian , Amin Gohari , Masoumeh Nasiri Kenari , Urbashi Mitra

In this paper, we consider the bacterial point-to-point and multiple-access molecular communications with ligand-receptors. For the point-to-point communication, we investigate common signaling methods, namely the Level Scenario (LS), which…

Information Theory · Computer Science 2015-09-22 Gholamali Aminian , Maryam Farahnak Ghazani , Mahtab Mirmohseni , Masoumeh Nasiri Kenari , Faramarz Fekri

The utility of limited feedback for coding over an individual sequence of DMCs is investigated. This study complements recent results showing how limited or noisy feedback can boost the reliability of communication. A strategy with fixed…

Information Theory · Computer Science 2016-11-17 Krishnan Eswaran , Anand D. Sarwate , Anant Sahai , Michael Gastpar

This paper studies the impact of a transmitter's molecule generation process on the capacity of a concentration based Molecular Communication (MC) system. Constraints caused by the molecule generation process affect the availability of the…

Information Theory · Computer Science 2018-02-27 Hamid G. Bafghi , Amin Gohari , Mahtab Mirmohseni , Masoumeh Nasiri-Kenari

We consider a unit memory channel, called Binary State Symmetric Channel (BSSC), in which the channel state is the modulo2 addition of the current channel input and the previous channel output. We derive closed form expressions for the…

Information Theory · Computer Science 2015-07-03 Christos K. Kourtellaris , Charalambos D. Charalambous

In distributed communication, each transmitter prepares an ensemble of channel codes. To encode a message, a transmitter chooses a channel code individually without sharing the coding choice with other transmitters or with the receiver.…

Information Theory · Computer Science 2018-05-08 Yanru Tang , Faeze Heydaryan , Jie Luo

We show that the amount of coherent quantum information that can be reliably transmitted down a dephasing channel with memory is maximized by separable input states. In particular, we model the channel as a Markov chain or a multimode…

Quantum Physics · Physics 2007-09-09 Antonio D'Arrigo , Giuliano Benenti , Giuseppe Falci

We study the discrete memoryless Z-interference channel (ZIC) where the transmitter of the pair that suffers from interference is cognitive. We first provide an upper bound on the capacity of this channel. We then show that, when the…

Information Theory · Computer Science 2012-02-16 Nan Liu , Ivana Maric , Yinghui Cheng , Andrea J. Goldsmith , Shlomo Shamai

We consider capacity of discrete-time channels with feedback for the general case where the feedback is a time-invariant deterministic function of the output samples. Under the assumption that the channel states take values in a finite…

Information Theory · Computer Science 2009-09-29 Haim Permuter , Tsachy Weissman , Andrea Goldsmith

In this work we find the capacity of a compound finite-state channel with time-invariant deterministic feedback. The model we consider involves the use of fixed length block codes. Our achievability result includes a proof of the existence…

Information Theory · Computer Science 2016-11-15 Brooke Shrader , Haim Permuter

Information theory provides powerful tools for understanding communication systems. This analysis can be applied to intercellular signal transduction, which is a means of chemical communication among cells and microbes. We discuss how to…

Quantitative Methods · Quantitative Biology 2016-11-15 Andrew W. Eckford , Kenneth A. Loparo , Peter J. Thomas
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