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This work studies optimal detection for communication over diffusion-based molecular timing (DBMT) channels. The transmitter simultaneously releases multiple information particles, where the information is encoded in the time of release.…

Information Theory · Computer Science 2017-09-12 Yonathan Murin , Nariman Farsad , Mainak Chowdhury , Andrea Goldsmith

Molecular communication via diffusion (MCvD) is a molecular communication method that utilizes the free diffusion of carrier molecules to transfer information at the nano-scale. Due to the random propagation of carrier molecules,…

Emerging Technologies · Computer Science 2019-09-20 Mustafa Can Gursoy , Ertugrul Basar , Ali Emre Pusane , Tuna Tugcu

In the domain of molecular communication (MC), information is conveyed through the characteristics of molecules transmitted between the transmitter and the receiver bionanosensors via propagation. The constrained size of the transmitter…

Information Theory · Computer Science 2025-08-07 Dongliang Jing , Linjuan Li , Lin Lin , Andrew W. Eckford

We study theoretically situations where competition arises between an interdiffusion process and a cross-linking chemical reaction at interfaces between pieces of the same polymer material. An example of such a situation is observable in…

Soft Condensed Matter · Physics 2009-11-07 Achod Aradian , Elie Raphael , Pierre-Gilles de Gennes

This survey paper focuses on the estimation schemes in molecular communication (MC) systems. The existing studies in estimation schemes can be divided into parameter estimation (e.g., distance, diffusion coefficient, and flow velocity) and…

Information Theory · Computer Science 2021-07-20 Xinyu Huang , Yuting Fang , Nan Yang

Large data sets often require performing distributed statistical estimation, with a full data set split across multiple machines and limited communication between machines. To study such scenarios, we define and study some refinements of…

Information Theory · Computer Science 2014-06-24 John C. Duchi , Michael I. Jordan , Martin J. Wainwright , Yuchen Zhang

Mass spectrometry plays a fundamental role in elucidating the structures of unknown molecules and subsequent scientific discoveries. One formulation of the structure elucidation task is the conditional de novo generation of molecular…

Machine Learning · Computer Science 2025-05-29 Montgomery Bohde , Mrunali Manjrekar , Runzhong Wang , Shuiwang Ji , Connor W. Coley

In this paper, we investigate the achievable rate of a diffusive Molecular Communication (MC) channel with fully absorbing receiver, which counts particles absorbed along each symbol interval and resets the counter at every interval…

Information Theory · Computer Science 2023-06-08 Fardad Vakilipoor , Luca Barletta , Stefano Bregni , Maurizio Magarini

Molecular communications (MC), where molecules are used to encode, transmit, and receive information, is a promising means of enabling the coordination of nanoscale devices. The paradigm has been extensively studied from various aspects,…

Emerging Technologies · Computer Science 2016-03-29 Murat Kuscu , Ozgur B. Akan

Intracellular protein patterns regulate many vital cellular functions, such as the processing of spatiotemporal information or the control of shape deformations. To do so, pattern-forming systems can be sensitive to the cell geometry by…

Biological Physics · Physics 2024-05-15 Tom Burkart , Benedikt J. Müller , Erwin Frey

Symbol synchronization refers to the estimation of the start of a symbol interval and is needed for reliable detection. In this paper, we develop several symbol synchronization schemes for molecular communication (MC) systems where we…

Information Theory · Computer Science 2017-09-05 Vahid Jamali , Arman Ahmadzadeh , Robert Schober

This paper considers the capacity of a diffusion-based molecular communication link assuming the receiver uses chemical reactions. The key contribution is we show that enzymatic reaction cycles, which is a class of chemical reactions…

Information Theory · Computer Science 2018-08-09 Hamdan Awan , Chun Tung Chou

We provide a fundamental treatment of the molecular communication channel wherein "inscribed matter" is transmitted across a spatial gap to provide reliable signaling between a sender and receiver. Inscribed matter is defined as an ensemble…

Emerging Technologies · Computer Science 2020-09-22 Christopher Rose , Ismat Saira Mian

In this work, we consider diffusion-based molecular communication with and without drift between two static nano-machines. We employ type-based information encoding, releasing a single molecule per information bit. At the receiver, we…

Information Theory · Computer Science 2018-07-13 Werner Haselmayr , Neeraj Varshney , A. Taufiq Asyhari , Andreas Springer , Weisi Guo

The derivation of suitable analytical models is an important step for the design and analysis of molecular communication systems. However, many existing models have limited applicability in practical scenarios due to various simplifications…

Emerging Technologies · Computer Science 2019-11-28 Maximilian Schäfer , Wayan Wicke , Werner Haselmayr , Rudolf Rabenstein , Robert Schober

Cells measure concentrations of external ligands by capturing ligand molecules with cell surface receptors. The numbers of molecules captured by different receptors co-vary because they depend on the same extrinsic ligand fluctuations.…

Neurons and Cognition · Quantitative Biology 2016-09-21 Vijay Singh , Martin Tchernookov , Ilya Nemenman

We consider parameter estimation in distributed networks, where each sensor in the network observes an independent sample from an underlying distribution and has $k$ bits to communicate its sample to a centralized processor which computes…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-23 Yanjun Han , Ayfer Özgür , Tsachy Weissman

Information molecules play a crucial role in molecular communication (MC), acting as carriers for information transfer. A common approach to get information molecules in MC involves harvesting them from the environment; however, the…

Information Theory · Computer Science 2025-08-08 Dongliang Jing , Linjuan Li , Zhen Cheng , Lin Lin , Andrew W. Eckford

In this paper, we propose three novel modulation techniques, i.e., concentration-based, molecular-type-based, and molecular-ratio-based, using isomers as messenger molecules for nano communication networks via diffusion. To evaluate…

Information Theory · Computer Science 2012-08-01 Na-Rae Kim , Chan-Byoung Chae

In-body communication is an upcoming field with significant implications for medical diagnostics and therapeutic interventions. Microbubbles have gained attention due to their distinct physical properties, making them promising candidates…

Signal Processing · Electrical Eng. & Systems 2026-03-23 Annika Tjabben , Lea Bergkemper , Carolin Conrad , Michael Gundall , Hans D. Schotten
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