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Quasi-trees generalize trees in that the unique "path" between two nodes may be infinite and have any countable order type. They are used to define the rank-width of a countable graph in such a way that it is equal to the least upper-bound…
Phylogenetic networks are a generalization of evolutionary trees that are used by biologists to represent the evolution of organisms which have undergone reticulate evolution. Essentially, a phylogenetic network is a directed acyclic graph…
Mobiles are a particular class of decorated plane trees which serve as codings for planar maps. Here we address the question of enumerating mobiles in their most general flavor, in correspondence with planar Eulerian (i.e., bicolored) maps.…
Evolution is a process that is influenced by various environmental factors, e.g. the interactions between different species, genes, and biogeographical properties. Hence, it is interesting to study the combined evolutionary history of…
Bidirectional motion planning often reduces planning time compared to its unidirectional counterparts. It requires connecting the forward and reverse search trees to form a continuous path. However, this process could fail and restart the…
The SPQR-tree is a data structure that compactly represents all planar embeddings of a biconnected planar graph. It plays a key role in constrained planarity testing. We develop a similar data structure, called the UP-tree, that compactly…
Bona [2007+] studied the distribution of ascents, plateaux and descents in the class of Stirling permutations, introduced by Gessel and Stanley [1978]. Recently, Janson [2008+] showed the connection between Stirling permutations and plane…
The active bijection for oriented matroids (and real hyperplane arrangements, and graphs, as particular cases) is introduced and investigated by the authors in a series of papers. Given any oriented matroid defined on a linearly ordered…
We propose efficient algorithms for enumerating the notorious combinatorial structures of maximal planar graphs, called canonical orderings and Schnyder woods, and the related classical graph drawings by de Fraysseix, Pach, and Pollack…
Dyck tilings are certain tilings in the region surrounded by two Dyck paths. We study bijections and combinatorial objects bijective to Dyck tilings, which include Dyck tiling strip (DTS) and Dyck tiling ribbon (DTR) bijections, increasing…
This work addresses an enumeration problem on weighted bi-colored plane trees with prescribed vertex data, with all vertices labeled distinctly. We give a bijection proof of the enumeration formula originally due to Kochetkov, hence…
Hereditary chip-firing models generalize the Abelian sandpile model and the cluster firing model to an exponential family of games induced by covers of the vertex set. This generalization retains some desirable properties, e.g.…
We study a model of random $\mathcal{R}$-enriched trees that is based on weights on the $\mathcal{R}$-structures and allows for a unified treatment of a large family of random discrete structures. We establish distributional limits…
Motivated by a demand for explicit genus 1 Belyi maps from theoretical physics, we give an efficient method of explicitly computing genus one Belyi maps by (1) composing covering maps from elliptic curves to the Riemann sphere with simpler…
The generalized composition graph is used by Cardoso and some researchers for factorization of the adjacency spectrum and Laplacian of a simple graph. Because the generalized composition graph is an example of a set-theoretic linear operad,…
The diffusion of minimally invasive, endovascular interventions motivates the development of visualization methods for complex vascular networks. We propose a planar representation of blood vessel trees which preserves the properties that…
We define a special case of tree decompositions for planar graphs that respect a given embedding of the graph. We study the analogous width of the resulting decomposition we call the embedded-width of a plane graph. We show both upper…
We address the enumeration of Eulerian orientations of 4-valent planar maps according to three parameters: the number of vertices, the number of alternating vertices (having in/out/in/out incident edges), and the number of clockwise…
The Baxter number can be written as $B_n = \sum_0^n \Theta_{k,n-k-1}$. These numbers have first appeared in the enumeration of so-called Baxter permutations; $B_n$ is the number of Baxter permutations of size $n$, and $\Theta_{k,l}$ is the…
We introduce and study a notion of decomposition of planar point sets (or rather of their chirotopes) as trees decorated by smaller chirotopes. This decomposition is based on the concept of mutually avoiding sets (which we rephrase as…