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We construct a reliable estimation of evolutionary parameters within the Wright-Fisher model, which describes changes in allele frequencies due to selection and genetic drift, from time-series data. Such data exists for biological…

Populations and Evolution · Quantitative Biology 2023-05-26 Juan Guerrero Montero , Richard A. Blythe

In this paper we consider the 2-component reaction-diffusion model that was recently obtained by a systematic reduction of the 3-component Gilad et al. model for dryland ecosystem dynamics. The nonlinear structure of this model is more…

Dynamical Systems · Mathematics 2020-08-26 Olfa Jaibi , Arjen Doelman , Martina Chirilus-Bruckner , Ehud Meron

By analyzing two Kinetically Constrained Models of supercooled liquids we show that the anomalous transport of a driven tracer observed in supercooled liquids is another facet of the phenomenon of dynamical heterogeneity. We focus on the…

Statistical Mechanics · Physics 2016-07-06 Giacomo Gradenigo , Eric Bertin , Giulio Biroli

We study the mathematical theory of second order systems with two species, arising in the dynamics of interacting particles subject to linear damping, to nonlocal forces and to external ones, and resulting into a nonlocal version of the…

Analysis of PDEs · Mathematics 2022-10-13 Marco Di Francesco , Simone Fagioli , Valeria Iorio

We unravel the ground state properties and emergent non-equilibrium dynamics of a mixture consisting of a few spin-polarized fermions embedded in a two-dimensional bosonic quantum droplet. For an increasingly attractive droplet-fermion…

Quantum Gases · Physics 2024-09-02 Jose Carlos Pelayo , Thomás Fogarty , Thomas Busch , Simeon I. Mistakidis

A new model to investigate environmental effects of genetically distinguishable predators is presented. The Holling type II response function, modelling feeding satiation, leads to persistent system's oscillations, as in classical…

Dynamical Systems · Mathematics 2014-03-19 Clara Viberti , Ezio Venturino

Key traits of unicellular species, like cell size, often follow scale-free or self-similar distributions, hinting at the possibility of an underlying critical process. However, linking such empirical scaling laws to the critical regime of…

Populations and Evolution · Quantitative Biology 2020-05-20 Jenny Held , Tom Lorimer , Francesco Pomati , Ruedi Stoop , Carlo Albert

Here we postulate three laws which form a mathematical framework to capture the essence of Darwinian evolutionary dynamics. The second law is most quantitative and is explicitly expressed by a unique form of stochastic differential…

Quantitative Methods · Quantitative Biology 2007-05-23 P. Ao

This work focuses on a class of regime-switching jump diffusion processes, in which the switching component has countably infinite many states or regimes. The existence and uniqueness of the underlying process are obtained by an interlacing…

Probability · Mathematics 2017-02-06 Fubao Xi , Chao Zhu

We consider a finite number of particles that move in $\mathbb Z$ as independent random walks. The particles are of two species that we call $a$ and $b$. The rightmost $a$ particle becomes a $b$ particle at constant rate, while the leftmost…

Probability · Mathematics 2014-12-16 Anna de Masi , Pablo A. Ferrari

We study measures on random partitions, arising from condensing stochastic particle systems with stationary product distributions. We provide fairly general conditions on the stationary weights, which lead to Poisson-Dirichlet statistics of…

Probability · Mathematics 2023-03-06 Paul Chleboun , Simon Gabriel , Stefan Grosskinsky

The Wright-Fisher model and the Moran model are both widely used in population genetics. They describe the time evolution of the frequency of an allele in a well-mixed population with fixed size. We propose a simple and tractable model…

Populations and Evolution · Quantitative Biology 2024-12-30 Arthur Alexandre , Alia Abbara , Cecilia Fruet , Claude Loverdo , Anne-Florence Bitbol

Mutualistic interactions, where individuals from different species can benefit from each other, are widespread across ecosystems. This study develops a general deterministic model of mutualism involving two populations, assuming that…

Populations and Evolution · Quantitative Biology 2026-02-26 Chloë Mian , Sylvain Billiard , Violaine Llaurens , Charline Smadi

We use Molecular Dynamics combined with Dissipative Particle Dynamics to construct a model of a binary mixture where the two species differ only in their dynamic properties (friction coefficients). For an asymmetric mixture of slow and fast…

Soft Condensed Matter · Physics 2009-11-11 Jacqueline Yaneva , Burkhard Duenweg , Andrey Milchev

Multitype branching processes with immigration in one type are used to model the dynamics of stage-structured plant populations. Parametric inference is first carried out when count data of all types are observed. Statistical…

Applications · Statistics 2009-02-27 Catherine Laredo , Olivier David , Aurélie Garnier

The different cell types in a living organism acquire their identity through the process of cell differentiation in which the multipotent progenitor cells differentiate into distinct cell types. Experimental evidence and analysis of…

Cell Behavior · Quantitative Biology 2015-06-19 Mainak Pal , Sayantari Ghosh , Indrani Bose

McNamara and Dall (2011) identified novel relationships between the abundance of a species in different environments, the temporal properties of environmental change, and selection for or against dispersal. Here, the mathematics underlying…

Populations and Evolution · Quantitative Biology 2013-02-04 Lee Altenberg

We establish the existence and pathwise uniqueness of regime-switching diffusion processes in an infinite state space, which could be time-inhomogeneous and state-dependent. Then the strong Feller properties of these processes are…

Probability · Mathematics 2015-07-30 Jinghai Shao

We consider a two-dimensional model of double-diffusive convection and its time discretisation using a second-order scheme which treat the nonlinear term explicitly (backward differentiation formula with a one-leg method). Uniform bounds on…

Numerical Analysis · Mathematics 2014-02-28 Florentina Tone , Xiaoming Wang , Djoko Wirosoetisno

We introduce and analyze two general dynamical models for unidirectional movement of particles along a circular chain and an open chain of sites. The models include a soft version of the simple exclusion principle, that is, as the density…

Quantitative Methods · Quantitative Biology 2019-03-14 Eyal Bar-Shalom , Alexander Ovseevich , Michael Margaliot