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In this paper, we present the following results: (1) We propose a new \emph{dynamic compressed index} of $O(w)$ space, that supports searching for a pattern $P$ in the current text in $O(|P| f(M,w) + \log w \log |P| \log^* M (\log N + \log…

Data Structures and Algorithms · Computer Science 2016-04-07 Takaaki Nishimoto , I Tomohiro , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

We propose a general algorithm of constructing an extended formulation for any given set of linear constraints with integer coefficients. Our algorithm consists of two phases: first construct a decision diagram $(V,E)$ that somehow…

Data Structures and Algorithms · Computer Science 2023-09-07 Yuta Kurokawa , Ryotaro Mitsuboshi , Haruki Hamasaki , Kohei Hatano , Eiji Takimoto , Holakou Rahmanian

A Straight-Line Program (SLP) for a string $T$ is a context-free grammar in Chomsky normal form that derives $T$ only, which can be seen as a compressed form of $T$. Kida et al.\ introduced collage systems [Theor. Comput. Sci., 2003] to…

Data Structures and Algorithms · Computer Science 2026-01-27 Soichiro Migita , Kyotaro Uehata , Tomohiro I

The Longest Common Subsequence (LCS) of two strings is a fundamental string similarity measure with a classical dynamic programming solution taking quadratic time. Despite significant efforts, little progress was made in improving the…

Data Structures and Algorithms · Computer Science 2021-12-17 Negev Shekel Nosatzki

It is shown that every tree of size $n$ over a fixed set of $\sigma$ different ranked symbols can be decomposed (in linear time as well as in logspace) into $O\big(\frac{n}{\log_\sigma n}\big) = O\big(\frac{n \log \sigma}{\log n}\big)$ many…

Data Structures and Algorithms · Computer Science 2015-09-22 Moses Ganardi , Danny Hucke , Artur Jez , Markus Lohrey , Eric Noeth

We show how to determine whether a given pattern p of length m occurs in a given text t of length n in ${\tilde O}(\sqrt{n}+\sqrt{m})$\footnote{${\tilde O}$ allows for logarithmic factors in m and $n/m$} time, with inverse polynomial…

Quantum Physics · Physics 2007-05-23 H. Ramesh , V. Vinay

Given strings $P$ and $Q$ the (exact) string matching problem is to find all positions of substrings in $Q$ matching $P$. The classical Knuth-Morris-Pratt algorithm [SIAM J. Comput., 1977] solves the string matching problem in linear time…

Data Structures and Algorithms · Computer Science 2010-09-08 Philip Bille

We study algorithms for approximating pairwise similarity matrices that arise in natural language processing. Generally, computing a similarity matrix for $n$ data points requires $\Omega(n^2)$ similarity computations. This quadratic…

Machine Learning · Computer Science 2022-04-28 Archan Ray , Nicholas Monath , Andrew McCallum , Cameron Musco

Search applications often display shortened sentences which must contain certain query terms and must fit within the space constraints of a user interface. This work introduces a new transition-based sentence compression technique developed…

Computation and Language · Computer Science 2019-09-19 Abram Handler , Brendan O'Connor

We offer multiplication method for factoring big natural numbers which extends the group of the Fermat's and Lehman's factorization algorithms and has run-time complexity $O(n^{1/3})$. This paper is argued the finiteness of proposed…

Data Structures and Algorithms · Computer Science 2019-04-01 Igor Nesiolovskiy , Artem Nesiolovskiy

A seed in a word is a relaxed version of a period in which the occurrences of the repeating subword may overlap. We show a linear-time algorithm computing a linear-size representation of all the seeds of a word (the number of seeds might be…

Data Structures and Algorithms · Computer Science 2019-03-15 Tomasz Kociumaka , Marcin Kubica , Jakub Radoszewski , Wojciech Rytter , Tomasz Walen

We study the classical approximate string matching problem, that is, given strings $P$ and $Q$ and an error threshold $k$, find all ending positions of substrings of $Q$ whose edit distance to $P$ is at most $k$. Let $P$ and $Q$ have…

Data Structures and Algorithms · Computer Science 2011-03-21 Philip Bille

While existing algorithms may be used to solve a linear system over a general field in matrix-multiplication time, the complexity of constructing a symmetric triangular factorization (LDL) has received relatively little formal study. The…

Numerical Analysis · Mathematics 2025-06-26 Edgar Solomonik

We present an algorithm that computes the Lempel-Ziv decomposition in $O(n(\log\sigma + \log\log n))$ time and $n\log\sigma + \epsilon n$ bits of space, where $\epsilon$ is a constant rational parameter, $n$ is the length of the input…

Data Structures and Algorithms · Computer Science 2015-06-09 Dmitry Kosolobov

We study the classic Text-to-Pattern Hamming Distances problem: given a pattern $P$ of length $m$ and a text $T$ of length $n$, both over a polynomial-size alphabet, compute the Hamming distance between $P$ and $T[i\, .\, . \, i+m-1]$ for…

Data Structures and Algorithms · Computer Science 2024-12-20 Timothy M. Chan , Ce Jin , Virginia Vassilevska Williams , Yinzhan Xu

Classically, the edit distance of two length-$n$ strings can be computed in $O(n^2)$ time, whereas an $O(n^{2-\epsilon})$-time procedure would falsify the Orthogonal Vectors Hypothesis. If the edit distance does not exceed $k$, the running…

Data Structures and Algorithms · Computer Science 2023-11-06 Daniel Gibney , Ce Jin , Tomasz Kociumaka , Sharma V. Thankachan

This paper presents a linear FPT algorithm to find a tree decomposition with a 2-approximation of the treewidth with a significantly smaller exponential dependence on the treewidth. The algorithm runs in time $O(\text{poly}(k) 81^k n)$,…

Data Structures and Algorithms · Computer Science 2025-07-08 Mahdi Belbasi , Martin Fürer , Medha Kumar

In this paper, we consider two versions of the Text Assembling problem. We are given a sequence of strings $s^1,\dots,s^n$ of total length $L$ that is a dictionary, and a string $t$ of length $m$ that is texts. The first version of the…

Quantum Physics · Physics 2024-04-05 Kamil Khadiev , Carlos Manuel Bosch Machado , Zeyu Chen , Junde Wu

Given a string $s$ of length $n$ over a general alphabet and an integer $k$, the problem is to decide whether $s$ is a concatenation of $k$ nonempty palindromes. Two previously known solutions for this problem work in time $O(kn)$ and…

Data Structures and Algorithms · Computer Science 2020-07-07 Mikhail Rubinchik , Arseny M. Shur

We conceptualize the process of understanding as information compression, and propose a method for ranking large language models (LLMs) based on lossless data compression. We demonstrate the equivalence of compression length under…

Artificial Intelligence · Computer Science 2024-06-21 Peijia Guo , Ziguang Li , Haibo Hu , Chao Huang , Ming Li , Rui Zhang