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Related papers: Nutrient Shielding in Clusters of Cells

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In this paper, we study a tumor growth model with nutrients. The contact inhibition for the tumor cells, presented in the model, results in the evolution of a congested tumor patch. We study the regularity of the tumor patch as the…

Analysis of PDEs · Mathematics 2022-12-01 Inwon Kim , Jona Lelmi

Evolution of the spatial arrangement of cells in a primary culture of cardiac tissue derived from newborn rats was studied experimentally over extended period. It was found that cells attract each other spontaneously to form a clustered…

Cell Behavior · Quantitative Biology 2009-11-13 Takahiro Harada , Akihiro Isomura , Kenichi Yoshikawa

The villi and crypts of the gastrointestinal tract increase the effective surface area of the intestinal mucosa, potentially enhancing nutrient absorption. It is commonly assumed that this is their primary function, and that a higher villi…

Tissues and Organs · Quantitative Biology 2025-08-26 Martin Garic , Rohan Vernekar , Dácil I. Yánez Martín , Stéphane Tanguy , Clément de Loubens , Claude Loverdo

Cell growth in size is a complex process coordinated by intrinsic and environmental signals. In a recent work [Tzur et al., Science, 2009, 325:167-171], size distributions in an exponentially growing population of mammalian cells were used…

Cell Behavior · Quantitative Biology 2015-06-16 Yucheng Hu , Tianqi Zhu

We investigate the dynamics of a colony of crawling, proliferating cells with a minimal, mechanical cell model. The cells consist of two disks, modelling the cell body and a pseudopod, connected by a finite extensible spring. The cells…

Cell Behavior · Quantitative Biology 2019-04-11 Simon K. Schnyder , John J. Molina , Ryoichi Yamamoto

Cells employ control strategies to maintain a stable size. Dividing at a target size (the `sizer' strategy) is thought to produce the tightest size distribution. However, this result follows from phenomenological models that ignore the…

Biological Physics · Physics 2024-02-27 Motasem ElGamel , Andrew Mugler

Non-equilibrium cluster-cluster aggregation of particles diffusing in or at the cell membrane has been hypothesized to lead to domains of finite size in different biological contexts such as lipid rafts, cell adhesion complexes, or…

Soft Condensed Matter · Physics 2023-08-30 Renaud Baillou , Jonas Ranft

The ability of a cancer cell population to achieve heterogeneity in their phenotype distributions offers advantages in tumor invasiveness and drug resistance. Studying the mechanisms behind such observed heterogeneity in mammalian cells…

Cell Behavior · Quantitative Biology 2024-08-20 Simone Scalise , Giorgio Gosti , Giancarlo Ruocco , Giovanna Peruzzi , Mattia Miotto

Sessile ciliates attach to substrates and generate feeding currents to capture passing particulates and dissolved nutrients. Optimal ciliary activity that maximizes nutrient flux at the cell surface while minimizing the rate of hydrodynamic…

Fluid Dynamics · Physics 2024-12-24 Jingyi Liu , Yi Man , Eva Kanso

It is well known that dietary habits have a significant influence on health. While many studies have been conducted to understand this relationship, little is known about the relationship between eating environments and health. Yet…

Computer Vision and Pattern Recognition · Computer Science 2019-11-12 Sri Kalyan Yarlagadda , Sriram Baireddy , David Güera , Carol J. Boushey , Deborah A. Kerr , Fengqing Zhu

The dynamics of growth of bacterial populations has been extensively studied for planktonic cells in well-agitated liquid culture, in which all cells have equal access to nutrients. In the real world, bacteria are more likely to live in…

Populations and Evolution · Quantitative Biology 2017-11-01 Xinxian Shao , Andrew Mugler , Justin Kim , Ha Jun Jeong , Bruce Levin , Ilya Nemenman

Chirality in shape and motility can evolve rapidly in microbes and cancer cells. To determine how chirality affects cell fitness, we developed a model of chiral growth in compact aggregates such as microbial colonies and solid tumors. Our…

Populations and Evolution · Quantitative Biology 2020-07-14 Ashish B. George , Kirill S. Korolev

Eukaryotic cells sense chemical gradients to decide where and when to move. Clusters of cells can sense gradients more accurately than individual cells by integrating measurements of the concentration made across the cluster. Is this…

Cell Behavior · Quantitative Biology 2021-10-22 Emiliano Perez Ipiña , Brian A. Camley

Cells coexist together in colonies or as tissues. Their behaviour is controlled by an interplay between intercellular forces and biochemical regulation. We develop a simple model of the cell cycle, the fundamental regulatory network…

Biological Physics · Physics 2021-08-04 Jintao Li , Simon K. Schnyder , Matthew S. Turner , Ryoichi Yamamoto

In this paper a macroscopic model of tumor cord growth is developed, relying on the mathematical theory of deformable porous media. Tumor is modeled as a saturated mixture of proliferating cells, extracellular fluid and extracellular…

Mathematical Physics · Physics 2010-11-09 Andrea Tosin

Despite the importance that fluid flow plays in transporting and organizing populations, few laboratory systems exist to systematically investigate the impact of advection on their spatial evolutionary dynamics. To address this problem, we…

Soft Condensed Matter · Physics 2019-07-03 Severine Atis , Bryan T. Weinstein , Andrew W. Murray , David R. Nelson

A major goal of modern computational biology is to simulate the collective behaviour of large cell populations starting from the intricate web of molecular interactions occurring at the microscopic level. In this paper we describe a…

Biological Physics · Physics 2007-05-23 Roberto Chignola , Edoardo Milotti

To explore the coupling between a growing population of microorganisms such as E. coli and a nonuniform nutrient distribution, we formulate a minimalistic model. It consists of active Brownian particles that divide and grow at a…

Biological Physics · Physics 2024-01-11 Till Welker , Holger Stark

In this paper, a two-dimensional model for the growth of multi-layer tumors is presented. The model consists of a free boundary problem for the tumor cell membrane and the tumor is supposed to grow or shrink due to cell proliferation or…

Analysis of PDEs · Mathematics 2013-06-11 Martin Kohlmann

We investigate the tumor boundary instability induced by nutrient consumption and supply based on a Hele-Shaw model derived from taking the incompressible limit of a cell density model. We analyze the boundary stability/instability in two…

Analysis of PDEs · Mathematics 2023-05-17 Yu Feng , Min Tang , Xiaoqian Xu , Zhennan Zhou