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This article is concerned with a version of the contact process with sexual reproduction on a graph with two levels of interactions modeling metapopulations. The population is spatially distributed into patches and offspring are produced in…

Probability · Mathematics 2013-07-26 Nicolas Lanchier

This article is concerned with a version of the contact process with sexual reproduction on a graph with two levels of interactions modeling metapopulations. The population is spatially distributed into patches and offspring are produced in…

Probability · Mathematics 2015-04-08 Eric Foxall , Nicolas Lanchier

Biologists have found that the death rate of cells in culture depends upon their spatial density. Permanent "Stay alive" signals from their neighbours seem to prevent them from dying. In a previous paper (Wang et al. 2013) we gave evidence…

Physics and Society · Physics 2013-06-24 Lei Wang , Yijuan Xu , Zengru Di , Bertrand M. Roehner

Collective escaping is a ubiquitous phenomenon in animal groups. Symmetry breaking caused by panic escape exhibits a shared feature across species that one exit is used more than the other when agents escaping from a closed space with two…

Quantitative Methods · Quantitative Biology 2020-06-04 Geng Li , Weijia Wang , Jiahui Lin , Zhiyang Huang , Jianqiang Liang , Huabo Wu , Jianping Wen , Zengru Di , Bertrand Roehner , Zhangang Han

Macroscopic changes of group behavior of eusocial insects are studied from the viewpoint of non-equilibrium phase transitions. Recent combined study of experiments and mathematical modeling by the group led by the third author suggests that…

Statistical Mechanics · Physics 2025-02-14 Saori Morimoto , Makoto Katori , Hiraku Nishimori

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

Adaptation and Self-Organizing Systems · Physics 2012-08-31 Andrzej Pekalski , Marcel Ausloos

In this paper, we study a flower population in which self-reproduction is not permitted. Individuals are diploid, {that is, each cell contains two sets of chromosomes}, and {distylous, that is, two alleles, A and a, can be found at the…

Probability · Mathematics 2013-07-04 Pauline Lafitte-Godillon , Kilian Raschel , Viet Chi Tran

Survival in groups of termites is known to be socially facilitated since individual longevity is increased together with the size of the group. Here we report on experimental evidence that survival as a function of group size in {\textit…

Biological Physics · Physics 2007-05-23 Og DeSouza , Octavio Miramontes

This paper presents an agent-based model of population desegregation and provides a thorough analysis of the social behavior leading to it, namely, the contact hypothesis. Based on the parameters of frequency and intensity of influence of…

Multiagent Systems · Computer Science 2019-05-24 Kashif Zia , Dinesh Kumar Saini , Arshad Muhammad , Alois Ferscha

In this paper, we establish the necessary and sufficient criterion for the contact process on Galton-Watson trees (resp. random graphs) to exhibit the phase of extinction (resp. short survival). We prove that the survival threshold…

Probability · Mathematics 2020-01-22 Shankar Bhamidi , Danny Nam , Oanh Nguyen , Allan Sly

Disentangling the processes leading populations to extinction is a major topic in ecology and conservation biology. The difficulty to find a mate in many species is one of these processes. Here, we investigate the impact of…

Populations and Evolution · Quantitative Biology 2012-01-05 Sylvain Billiard , Viet Chi Tran

Much of the research on the behavior of the SIS model on networks has concerned the infinite size limit; in particular the phase transition between a state where outbreaks can reach a finite fraction of the population, and a state where…

Populations and Evolution · Quantitative Biology 2015-07-13 Petter Holme

The extinction and persistence of infective individuals are closely related to the random change of the environment. In this paper, via the random/stochastic SIRS models, we analyze qualitatively and quantitatively the impact caused by the…

Probability · Mathematics 2018-10-01 Jianhai Bao , Jinghai Shao

Sexually reproducing populations with small number of individuals may go extinct by stochastic fluctuations in sex determination, causing all their members to become male or female in a generation. In this work we calculate the time to…

Populations and Evolution · Quantitative Biology 2012-10-24 David M. Schneider , Eduardo do Carmo , Yaneer Bar-Yam , Marcus A. M. de Aguiar

We study the evolution of cooperation as a birth-death process in spatially extended populations. The benefit from the altruistic behavior of a cooperator is implemented by decreasing the death rate of its direct neighbors. The cost of…

Populations and Evolution · Quantitative Biology 2020-04-14 Konstantin Klemm , Nagi Khalil

We consider a random process on recursive trees, with three types of events. Vertices give birth at a constant rate (growth), each edge may be removed independently (fragmentation of the tree) and clusters (or trees) are frozen with a rate…

Probability · Mathematics 2022-09-07 Vincent Bansaye , Chenlin Gu , Linglong Yuan

Researchers puzzle over questions as to how rare species survive extinction, and why a significant proportion of microbial taxa are dormant. Computational simulation modeling by a genetic algorithm provides some answers. First, a…

Populations and Evolution · Quantitative Biology 2025-07-01 Sasanka Sekhar Chanda

A mechanism of sympatric speciation is presented based on the interaction-induced developmental plasticity of phenotypes. First, phenotypes of individuals with identical genotypes split into a few groups, according to instability in the…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Kunihiko Kaneko

For any system, whether physical or non-physical, knowledge of the form and strength of inter-individual interactions is a key-information. In an approach based on statistical physics one needs to know the interaction Hamiltonian. For…

Biological Physics · Physics 2013-01-01 Zengru Di , Bertrand M. Roehner

The death of a biological population is an extreme event which we investigate here for a host-parasitoid system. Our simulations using the Penna ageing model show how biological evolution can ``teach'' the parasitoids to avoid extinction by…

Populations and Evolution · Quantitative Biology 2009-11-13 Dietrich Stauffer , Ana Proykova , Karl-Heinz Lampe
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