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This thesis looks at the electronic energy transfer in the Fenna-Matthews-Olson complex, in which evidence of long-lived coherence has been observed in 2-dimensional infrared experiments. I use three techniques: the numerically exact…

Chemical Physics · Physics 2015-03-12 David M. Wilkins

Quantum effects in photosynthetic energy transport in nature, especially for the typical Fenna-Matthews-Olson (FMO) complexes, are extensively studied in quantum biology. Such energy transport processes can be investigated as open quantum…

We provide physically intuitive mechanisms for the effect of noise on excitation energy transfer (EET) in networks. Using these mechanisms of dephasing-assisted transport (DAT) in a hybrid basis of both excitons and sites, we develop a…

Quantum Physics · Physics 2015-05-14 Alex W. Chin , Animesh Datta , Filippo Caruso , Susana F. Huelga , Martin B. Plenio

The Fenna-Mathews-Olson (FMO) complex present in green sulphur bacteria is known to mediate the transfer of excitation energy between light-harvesting chlorosomes and membrane-embedded bacterial reaction centres. Due to the high efficiency…

Chemical Physics · Physics 2023-09-19 Mousumi Kundu , C. M. Chandrashekar

Collective protein modes are expected to be important for facilitating energy transfer in the Fenna-Matthews-Olson (FMO) complex, however to date little work has focussed on the microscopic details of these vibrations. The nonlinear network…

Biological Physics · Physics 2016-07-07 Sarah E Morgan , Daniel J Cole , Alex W Chin

In this Article we perform a systematic study of the global entanglement and exciton coherence length dynamics coherence in natural light-harvesting system Fenna-Matthews-Olson (FMO) complex across various parameters of a dissipative…

Quantum Physics · Physics 2024-06-18 Luis E. Herrera Rodríguez , Alexei A. Kananenka

The coupled quantum dynamics of excitonic and vibrational degrees of freedom is investigated for high-dimensional models of the Fenna-Matthews-Olson (FMO) complex. This includes a seven and an eight-site model with 518 and 592 harmonic…

Chemical Physics · Physics 2016-05-12 Jan Schulze , Mohamed Shibl , Mohammed Al-Marri , Oliver Kühn

We study the environment-assisted enhancement of the excitation-transport efficiency across a network of interacting quantum particles or sites. Our study reveals a crucial influence of the network configuration - and especially its degree…

Quantum Physics · Physics 2017-08-25 James Cormican , Lorenzo Stella , Mauro Paternostro

We model and study the processes of excitation, absorption, and transfer in various networks. The model consists of a harmonic oscillator representing a single-mode radiation field, a qubit acting as an antenna, a network through which the…

Quantum Physics · Physics 2024-11-28 E. Ballarin , D. A. Chisholm , A. Smirne , M. Paternostro , F. Anselmi , S. Donadi

We study a linear chain of oscillators with inhomogeneity in their interactions with phonon bath. In a previous work on the Markovian master equation of the system, we investigated a model in which the difference in the site-phonon coupling…

Statistical Mechanics · Physics 2022-05-18 B. A. Tay

We investigate the role of long-lasting quantum coherence in the efficiency of energy transport at room temperature in Fenna-Matthews-Olson photosynthetic complexes. The excitation energy transfer due to the coupling of the light harvesting…

Mesoscale and Nanoscale Physics · Physics 2015-03-19 G. L. Celardo , F. Borgonovi , M. Merkli , V. I. Tsifrinovich , G. P. Berman

We present numerically exact results for the quantum coherent energy transfer in the Fenna-Matthews-Olson molecular aggregate under realistic physiological conditions, including vibrational fluctuations of the protein and the pigments for…

Mesoscale and Nanoscale Physics · Physics 2011-12-06 Peter Nalbach , Daniel Braun , Michael Thorwart

The Fenna Mathews Olson (FMO) complex of green sulphur bacteria is an example of a photosynthetic pigment protein complex, in which the electronic properties of the pigments are modified by the protein environment to promote efficient…

Biomolecules · Quantitative Biology 2014-07-23 Alexander S. Fokas , Daniel J. Cole , Alex W. Chin

Recent evidence of electronic coherence during energy transfer in photosynthetic antenna complexes has reinvigorated the discussion of whether coherence and/or entanglement has any practical functionality for these molecular systems. Here…

Quantum Physics · Physics 2015-03-13 Francesca Fassioli , Alexandra Olaya-Castro

The Wigner-Weisskopf-type model developed in [R. Alicki and F. Giraldi, J. Phys. B {\bf 44}, 154020 (2011)] is applied to the biological process of energy transfer from a large peripheral light harvesting antenna to the reaction center.…

Quantum Physics · Physics 2016-08-14 Robert Alicki , Wiesław Miklaszewski

We investigate the evolution of entanglement in the Fenna-Matthew-Olson (FMO) complex based on simulations using the scaled hierarchy equation of motion (HEOM) approach. We examine the role of multipartite entanglement in the FMO complex by…

Chemical Physics · Physics 2012-08-23 Jing Zhu , Sabre Kais , Alán Aspuru-Guzik , Sam Rodriques , Ben Brock , Peter J. Love

We develop a quantum scattering model to describe the exciton transport through the Fenna-Matthews-Olson(FMO) complex. It is found that the exciton transport involved the optimal quantum coherence is more efficient than that involved…

Biomolecules · Quantitative Biology 2016-12-28 Bao-quan Ai , Shi-liang Zhu

Particle or energy transfer through quantum networks is determined by network topology and couplings to environments. This study examines the combined effect of topology and external couplings on the efficiency of directional quantum…

Quantum Physics · Physics 2021-10-04 B. Hou , R. V. Krems

We study a large number of physically-plausible arrangements of chromophores, generated via a computational method involving stochastic real-space transformations of a naturally occurring `reference' structure, illustrating our methodology…

Chemical Physics · Physics 2017-05-23 George C. Knee , Patrick Rowe , Luke D. Smith , Alessandro Troisi , Animesh Datta

The time-evolution of multiparty quantum correlations as quantified by monogamy scores and bipartition collections of quantum correlations is investigated for light-harvesting complexes modeled by the fully connected and the…

Quantum Physics · Physics 2015-02-11 Titas Chanda , Utkarsh Mishra , Aditi Sen De , Ujjwal Sen