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Phase transitions are a fundamental concept in science describing diverse phenomena ranging from, e.g., the freezing of water to Bose-Einstein condensation. While the concept is well-established in equilibrium, similarly fundamental…

We propose a general model to study the interplay between spatial dispersal and environment spatiotemporal fluctuations in metapopulation dynamics. An ecological landscape of favorable patches is generated like a L\'{e}vy dust, which allows…

Populations and Evolution · Quantitative Biology 2015-08-20 E. H. Colombo , C. Anteneodo

The past few years have seen many advances in our understanding of the dynamics of polymeric fluids. These include improvements on the successful reptation theory; an emerging molecular theory of semiflexible chain dynamics; and an…

Soft Condensed Matter · Physics 2007-05-23 Peter D. Olmsted

While compactness is an essential assumption for many results in dynamical systems theory, for many applications the state space is only locally compact. Here we provide a general theory for compactifying such systems, i.e. embedding them…

Dynamical Systems · Mathematics 2010-04-05 Ethan Akin , Joseph Auslander

We adapt a fitness function from evolutionary game theory as a mechanism for aggregation and dispersal in a partial differential equation (PDE) model of two interacting populations, described by density functions $u$ and $v$. We consider a…

Populations and Evolution · Quantitative Biology 2018-03-16 Russ deForest , Andrew Belmonte

We discuss the effects of movement and spatial heterogeneity on population dynamics via reaction-diffusion-advection models, focusing on the persistence, competition, and evolution of organisms in spatially heterogeneous environments.…

Analysis of PDEs · Mathematics 2020-07-08 King-Yeung Lam , Shuang Liu , Yuan Lou

Inspired by one--dimensional light--particle systems, the dynamics of a non-Hamiltonian system with long--range forces is investigated. While the molecular dynamics does not reach an equilibrium state, it may be approximated in the…

Statistical Mechanics · Physics 2019-01-23 Romain Bachelard , Nicola Piovella , Shamik Gupta

Marine plankton play a crucial role in carbon storage, oxygen production, global climate, and ecosystem function. Planktonic ecosystems are embedded in a Lagrangian patches of water that are continuously moving, stretching, and diluting.…

Populations and Evolution · Quantitative Biology 2023-01-30 Enrico Ser-Giacomi , Ricardo Martinez-Garcia , Stephanie Dutkiewicz , Michael J. Follows

We propose an entropic geometrical model of crowd behavior dynamics (with dissipative crowd kinematics), using Feynman action--amplitude formalism that operates on three synergetic levels: macro, meso and micro. The intent is to explain the…

Adaptation and Self-Organizing Systems · Physics 2009-07-01 Vladimir G. Ivancevic , Darryn J. Reid , Eugene V. Aidman

This paper investigates the dynamics of biomass in a marine ecosystem. A stochastic process is defined in which organisms undergo jumps in body size as they catch and eat smaller organisms. Using a systematic expansion of the master…

Populations and Evolution · Quantitative Biology 2010-01-11 Samik Datta , Gustav W. Delius , Richard Law

In this paper, we consider the relationship between phase-type distributions and positive systems through practical examples. Phase-type distributions, commonly used in modelling dynamic systems, represent the temporal evolution of a set of…

Methodology · Statistics 2024-08-20 Luz Judith Rodríguez Esparza , Fernando Baltazar Larios

An adequate characterization of the dynamics of Hamiltonian systems at physically relevant scales has been largely lacking. Here we investigate this fundamental problem and we show that the finite-scale Hamiltonian dynamics is governed by…

Chaotic Dynamics · Physics 2007-05-23 Adilson E. Motter , Alessandro P. S. de Moura , Celso Grebogi , Holger Kantz

An inclusive framework for joined Hamiltonian and dissipative dynamical systems, which preserve energy and produce entropy, is given. The dissipative dynamics of the framework is based on the metriplectic 4-bracket, a quantity like the…

Mathematical Physics · Physics 2023-10-24 Philip J. Morrison , Michael H. Updike

Populations interact non-linearly and are influenced by environmental fluctuations. In order to have realistic mathematical models, one needs to take into account that the environmental fluctuations are inherently stochastic. Often,…

Probability · Mathematics 2025-07-29 Alexandru Hening , Siddharth Sabharwal

Natural ecosystems, in particular on the microbial scale, are inhabited by a large number of species. The population size of each species is affected by interactions of individuals with each other and by spatial and temporal changes in…

Populations and Evolution · Quantitative Biology 2023-06-23 Tom Burkart , Jan Willeke , Erwin Frey

Both natural ecosystems and biochemical reaction networks involve populations of heterogeneous agents whose cooperative and competitive interactions lead to a rich dynamics of species' abundances, albeit at vastly different scales. The…

Statistical Mechanics · Physics 2022-12-14 Eric De Giuli , Camille Scalliet

We develop a discrete Boltzmann-type model that uses dynamics in phase space to describe the behavior of traffic flows. Firstly, we model the traffic flow at mesoscopic scale using dynamics in phase space, which is considered as an…

Cellular Automata and Lattice Gases · Physics 2023-11-27 Zhizhen Zhang , Changhong Lu

Time-dependent potentials are common in galactic systems that undergo significant evolution, interactions, or encounters with other galaxies, or when there are dynamic processes like star formation and merging events. Recent studies show…

Astrophysics of Galaxies · Physics 2025-02-04 Eduárd Illés , Dániel Jánosi , Tamás Kovács

A microscopic agent dynamical model for diploid age-structured populations is used to study evolution of polymorphism and sympatric speciation. The underlying ecology is represented by a unimodal distribution of resources of some width.…

Populations and Evolution · Quantitative Biology 2015-06-26 E. Brigatti , J. S. Sa' Martins , I. Roditi

The theory of slow manifolds is an important tool in the study of deterministic dynamical systems, giving a practical method by which to reduce the number of relevant degrees of freedom in a model, thereby often resulting in a considerable…

Statistical Mechanics · Physics 2013-07-01 George W A Constable , Alan J McKane , Tim Rogers