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We present an algorithm computing the longest periodic subsequence of a string of length $n$ in $O(n^7)$ time with $O(n^4)$ words of space. We obtain improvements when restricting the exponents or extending the search allowing the reported…

Data Structures and Algorithms · Computer Science 2022-02-16 Hideo Bannai , Tomohiro I , Dominik Köppl

The suffix array and the suffix tree are the two most fundamental data structures for string processing. For a length-$n$ text, however, they use $\Theta(n \log n)$ bits of space, which is often too costly. To address this, Grossi and…

Data Structures and Algorithms · Computer Science 2023-04-20 Dominik Kempa , Tomasz Kociumaka

This paper analyzes to what extent it is possible to efficiently reduce the number of clauses in NP-hard satisfiability problems, without changing the answer. Upper and lower bounds are established using the concept of kernelization.…

Computational Complexity · Computer Science 2019-07-01 Bart M. P. Jansen , Astrid Pieterse

A closed string $u$ is either of length one or contains a border that occurs only as a prefix and as a suffix in $u$ and nowhere else within $u$. In this paper, we present fast $\mathcal{O}(n\log n)$ time algorithms to compute all…

Data Structures and Algorithms · Computer Science 2026-01-12 Samkith K Jain , Neerja Mhaskar

Given a string $S$ of $n$ integers in $[0,\sigma)$, a range minimum query RMQ$(i, j)$ asks for the index of the smallest integer in $S[i \dots j]$. It is well known that the problem can be solved with a succinct data structure of size $2n +…

Data Structures and Algorithms · Computer Science 2019-05-30 Paweł Gawrychowski , Seungbum Jo , Shay Mozes , Oren Weimann

Tries are popular data structures for storing a set of strings, where common prefixes are represented by common root-to-node paths. Over fifty years of usage have produced many variants and implementations to overcome some of their…

Data Structures and Algorithms · Computer Science 2011-12-06 Roberto Grossi , Giuseppe Ottaviano

In this paper we study the fundamental problem of maintaining a dynamic collection of strings under the following operations: concat - concatenates two strings, split - splits a string into two at a given position, compare - finds the…

Data Structures and Algorithms · Computer Science 2016-04-11 Paweł Gawrychowski , Adam Karczmarz , Tomasz Kociumaka , Jakub Łącki , Piotr Sankowski

In memory-constrained algorithms we have read-only access to the input, and the number of additional variables is limited. In this paper we introduce the compressed stack technique, a method that allows to transform algorithms whose space…

Computational Geometry · Computer Science 2014-06-26 Luis Barba , Matias Korman , Stefan Langerman , Kunikiko Sadakane , Rodrigo Silveira

The Lempel-Ziv parsing of a string (LZ77 for short) is one of the most important and widely-used algorithmic tools in data compression and string processing. We show that the Lempel-Ziv parsing of a string of length $n$ on an alphabet of…

Data Structures and Algorithms · Computer Science 2015-07-28 Djamal Belazzougui , Simon J. Puglisi

This paper is an extended abstract of an analysis of term rewriting where the terms in the rewrite rules as well as the term to be rewritten are compressed by a singleton tree grammar (STG). This form of compression is more general than…

Logic in Computer Science · Computer Science 2013-02-27 Manfred Schmidt-Schauss

Given a string $T$ of length $N$, the goal of grammar compression is to construct a small context-free grammar generating only $T$. Among existing grammar compression methods, RePair (recursive paring) [Larsson and Moffat, 1999] is notable…

Data Structures and Algorithms · Computer Science 2018-11-06 Kensuke Sakai , Tatsuya Ohno , Keisuke Goto , Yoshimasa Takabatake , Tomohiro I , Hiroshi Sakamoto

We give a high precision polynomial-time approximation scheme for the supremum of any honest n-variate (n+2)-nomial with a constant term, allowing real exponents as well as real coefficients. Our complexity bounds count field operations and…

Algebraic Geometry · Mathematics 2010-11-09 Philippe Pebay , J. Maurice Rojas , David C. Thompson

Let a text $T[1..n]$ be the only string generated by a context-free grammar with $g$ (terminal and nonterminal) symbols, and of size $G$ (measured as the sum of the lengths of the right-hand sides of the rules). Such a grammar, called a…

Data Structures and Algorithms · Computer Science 2020-04-03 Francisco Claude , Gonzalo Navarro , Alejandro Pacheco

The Kolmogorov complexity of x, denoted C(x), is the length of the shortest program that generates x. For such a simple definition, Kolmogorov complexity has a rich and deep theory, as well as applications to a wide variety of topics…

Computational Complexity · Computer Science 2017-02-17 Stephen Fenner , Lance Fortnow

We consider the problem of computing the q-gram profile of a string \str of size $N$ compressed by a context-free grammar with $n$ production rules. We present an algorithm that runs in $O(N-\alpha)$ expected time and uses $O(n+q+\kq)$…

Data Structures and Algorithms · Computer Science 2014-06-09 Philip Bille , Patrick Hagge Cording , Inge Li Gørtz

A string $w$ is called a minimal absent word (MAW) for a string $S$ if $w$ does not occur as a substring in $S$ and all proper substrings of $w$ occur in $S$. MAWs are well-studied combinatorial string objects that have potential…

Data Structures and Algorithms · Computer Science 2023-08-01 Kouta Okabe , Takuya Mieno , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai

Repeat finding in strings has important applications in subfields such as computational biology. Surprisingly, all prior work on repeat finding did not consider the constraint on the locality of repeats. In this paper, we propose and study…

Data Structures and Algorithms · Computer Science 2015-01-27 Atalay Mert İleri , M. Oğuzhan Külekci , Bojian Xu

In the era of big data, learning from categorical features with very large vocabularies (e.g., 28 million for the Criteo click prediction dataset) has become a practical challenge for machine learning researchers and practitioners. We…

Machine Learning · Computer Science 2019-05-01 MohammadHossein Bateni , Lin Chen , Hossein Esfandiari , Thomas Fu , Vahab S. Mirrokni , Afshin Rostamizadeh

Two strings are considered to have parameterized matching when there exists a bijection of the parameterized alphabet onto itself such that it transforms one string to another. Parameterized matching has application in software duplication…

Data Structures and Algorithms · Computer Science 2024-12-03 Apurba Saha , Iftekhar Hakim Kaowsar , Mahdi Hasnat Siyam , M. Sohel Rahman

In a lossless compression system with target lengths, a compressor ${\cal C}$ maps an integer $m$ and a binary string $x$ to an $m$-bit code $p$, and if $m$ is sufficiently large, a decompressor ${\cal D}$ reconstructs $x$ from $p$. We call…

Information Theory · Computer Science 2019-11-12 Bruno Bauwens , Marius Zimand
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