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Motivation: Bioinformatics is faced with a variety of problems that require human involvement. Tasks like genome annotation, image analysis, knowledge-base construction and protein structure determination all benefit from human input. In…

Quantitative Methods · Quantitative Biology 2013-07-01 Benjamin M. Good , Andrew I. Su

Workflows are prevalent in today's computing infrastructures. The workflow model support various different domains, from machine learning to finance and from astronomy to chemistry. Different Quality-of-Service (QoS) requirements and other…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-22 Laurens Versluis , Alexandru Iosup

While the animal bioacoustics community at large is collecting huge amounts of acoustic data at an unprecedented pace, processing these data is problematic. Currently in bioacoustics, there is no effective way to achieve high performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-06 Peter J. Dugan , Christopher W. Clark , Yann André LeCun , Sofie M. Van Parijs

Principles of modern cyber-physical system (CPS) analysis are based on analytical methods that depend on whether safety or liveness requirements are considered. Complexity is abstracted through different techniques, ranging from stochastic…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-02 Eric M. S. P. Veith , Lars Fischer , Martin Tröschel , Astrid Nieße

The delivery of key services in domains ranging from finance and manufacturing to healthcare and transportation is underpinned by a rapidly growing number of mission-critical enterprise applications. Ensuring the continuity of these complex…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-23 Premathas Somasekaram , Radu Calinescu , Rajkumar Buyya

Public Good Software's products match journalistic articles and other narrative content to relevant charitable causes and nonprofit organizations so that readers can take action on the issues raised by the articles' publishers. Previously…

Computers and Society · Computer Science 2017-10-25 Eric Kingery , Michael S. Manley , Daniel Ratner

Artificial Intelligence (AI) has emerged as a transformative technology with the potential to revolutionize various sectors, from healthcare to finance, education, and beyond. However, successfully implementing AI systems remains a complex…

Computers and Society · Computer Science 2025-02-04 Dian Tjondronegoro

Theoretical analyses of stochastic search algorithms, albeit few, have always existed since these algorithms became popular. Starting in the nineties a systematic approach to analyse the performance of stochastic search heuristics has been…

Neural and Evolutionary Computing · Computer Science 2017-09-05 Per Kristian Lehre , Pietro S. Oliveto

In recent years, there has been a growing interest in employing intelligent agents in writing. Previous work emphasizes the evaluation of the quality of end product-whether it was coherent and polished, overlooking the journey that led to…

Human-Computer Interaction · Computer Science 2024-05-22 Ruyuan Wan , Simret Gebreegziabhe , Toby Jia-Jun Li , Karla Badillo-Urquiola

This paper introduces the idea of mining container image repositories for configuration and other deployment information of software systems. Unlike traditional software repositories (e.g., source code repositories and app stores), image…

Software Engineering · Computer Science 2018-02-14 Tianyin Xu , Darko Marinov

Modern applications and Operating Systems vary greatly with respect to how they register and identify different types of content. These discrepancies lead to exploits and inconsistencies in user experience. In this paper, we highlight the…

Cryptography and Security · Computer Science 2017-08-31 Theofilos Petsios , Adrian Tang , Dimitris Mitropoulos , Salvatore Stolfo , Angelos D. Keromytis , Suman Jana

This master thesis describes an algorithm for automated categorization of scientific documents using deep learning techniques and compares the results to the results of existing classification algorithms. As an additional goal a reusable…

Information Retrieval · Computer Science 2017-06-20 Thomas Krause

In an era where cyberattacks increasingly target the software supply chain, the ability to accurately attribute code authorship in binary files is critical to improving cybersecurity measures. We propose OCEAN, a contrastive learning-based…

Artificial Intelligence · Computer Science 2024-12-09 Felix Mächtle , Jan-Niclas Serr , Nils Loose , Jonas Sander , Thomas Eisenbarth

The Python ecosystem represents a global, data rich, technology-enabled network. By analyzing Python's dependency network, its top 14 most imported libraries and cPython (or core Python) libraries, this research finds clear evidence the…

Social and Information Networks · Computer Science 2022-01-19 Thomas Pike , Robert Colter , Mark Bailey , Jackie Kazil , John Speed Meyers

Topic modelling is a pivotal unsupervised machine learning technique for extracting valuable insights from large document collections. Existing neural topic modelling methods often encode contextual information of documents, while ignoring…

Computation and Language · Computer Science 2025-02-07 Yanan Ma , Chenghao Xiao , Chenhan Yuan , Sabine N van der Veer , Lamiece Hassan , Chenghua Lin , Goran Nenadic

Having a quality annotated corpus is essential especially for applied research. Despite the recent focus of Web science community on researching about cyberbullying, the community dose not still have standard benchmarks. In this paper, we…

Computation and Language · Computer Science 2018-05-25 Mohammadreza Rezvan , Saeedeh Shekarpour , Lakshika Balasuriya , Krishnaprasad Thirunarayan , Valerie Shalin , Amit Sheth

Answer Set Programming (ASP) is a logic-based knowledge representation framework, supporting---among other reasoning modes---the central task of query answering. In the propositional case, query answering amounts to computing cautious…

Logic in Computer Science · Computer Science 2018-04-24 Mario Alviano , Carmine Dodaro , Matti Järvisalo , Marco Maratea , Alessandro Previti

The ever-increasing amount of user-generated content online has led, in recent years, to an expansion in research and investment in automated content analysis tools. Scrutiny of automated content analysis has accelerated during the COVID-19…

Multimedia · Computer Science 2022-01-27 Carey Shenkman , Dhanaraj Thakur , Emma Llansó

Large-scale scientific datasets -- spanning health biobanks, cell atlases, Earth reanalyses, and more -- create opportunities for exploratory discovery unconstrained by specific research questions. We term this process hypothesis hunting:…

Artificial Intelligence · Computer Science 2025-10-13 Tennison Liu , Silas Ruhrberg Estévez , David L. Bentley , Mihaela van der Schaar

Algorithms have permeated throughout civil government and society, where they are being used to make high-stakes decisions about human lives. In this paper, we first develop a cohesive framework of algorithmic decision-making adapted for…

Human-Computer Interaction · Computer Science 2021-10-14 Devansh Saxena , Karla Badillo-Urquiola , Pamela Wisniewski , Shion Guha