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We give a constructive method for realizing an arbitrary directed graph (with no one-cycles) as a heteroclinic or an excitable dynamic network in the phase space of a system of coupled cells of two types. In each case, the system is…

Adaptation and Self-Organizing Systems · Physics 2015-12-17 Peter Ashwin , Claire Postlethwaite

Sequences of correlated binary patterns can represent many time-series data including text, movies, and biological signals. These patterns may be described by weighted combinations of a few dominant structures that underpin specific…

Machine Learning · Statistics 2019-03-29 Jimmy Gaudreault , Arunabh Saxena , Hideaki Shimazaki

This paper introduces a convex optimization framework for identifying switched network systems, in which both the node dynamics and the underlying graph topology switch between a finite number of configurations. Building on our recent…

Optimization and Control · Mathematics 2025-10-29 Kaito Iwasaki , Anthony Bloch , Maani Ghaffari

Time-continuous dynamical systems defined on graphs are often used to model complex systems with many interacting components in a non-spatial context. In the reverse sense attaching meaningful dynamics to given 'interaction diagrams' is a…

Molecular Networks · Quantitative Biology 2010-07-02 Markus Kirkilionis , Luca Sbano

We propose a dynamical neural network model with a hierarchical and modular structure. The network architecture can be derived by minimizing an energy function that is originally designed based on two kinds of neurons with quite different…

Neurons and Cognition · Quantitative Biology 2026-04-14 Kazuyoshi Tsutsumi , Ernst Niebur

The synchronous dynamics of an array of excitable oscillators, coupled via a generic graph, is studied. Non homogeneous perturbations can grow and destroy synchrony, via a self-consistent instability which is solely instigated by the…

Disordered Systems and Neural Networks · Physics 2018-05-23 Maxime Lucas , Duccio Fanelli , Timoteo Carletti , Julien Petit

Dynamical systems with complex behaviours, e.g. immune system cells interacting with a pathogen, are commonly modelled by splitting the behaviour into different regimes, or modes, each with simpler dynamics, and then learning the switching…

Computer Vision and Pattern Recognition · Computer Science 2023-06-02 Yongtuo Liu , Sara Magliacane , Miltiadis Kofinas , Efstratios Gavves

Being cognizant of the abundance of multi-body interactions in various complex systems, here we investigate a possible way to incorporate multi-body interactions in dynamical networks. Adopting hypergraph as the underlying architecture aids…

Dynamical Systems · Mathematics 2023-03-24 Anirban Banerjee , Samiron Parui

What can we learn from the collective dynamics of a complex network about its interaction topology? Taking the perspective from nonlinear dynamics, we briefly review recent progress on how to infer structural connectivity (direct…

Adaptation and Self-Organizing Systems · Physics 2014-08-14 Marc Timme , Jose Casadiego

Some of the basic properties of any dynamical system can be summarized by a graph. The dynamical systems in our theory run from maps like the logistic map to ordinary differential equations to dissipative partial differential equations. Our…

Dynamical Systems · Mathematics 2025-06-26 Chirag Adwani , Roberto De Leo , James A. Yorke

Revealing physical interactions in complex systems from observed collective dynamics constitutes a fundamental inverse problem in science. Current reconstruction methods require access to a system's model or dynamical data at a level of…

Physics and Society · Physics 2018-01-18 Mor Nitzan , Jose Casadiego , Marc Timme

Discrete-time regulatory networks are dynamical systems on directed graphs, with a structure inspired on natural systems of interacting units. There is a natural notion of determination amongst vertices, which we use to classify the nodes…

Adaptation and Self-Organizing Systems · Physics 2009-11-13 Beatriz Luna , Edgardo Ugalde

Dynamic networks are used in a wide range of fields, including social network analysis, recommender systems, and epidemiology. Representing complex networks as structures changing over time allow network models to leverage not only…

Social and Information Networks · Computer Science 2021-06-15 Joakim Skarding , Bogdan Gabrys , Katarzyna Musial

Many natural systems are organized as networks, in which the nodes interact in a time-dependent fashion. The object of our study is to relate connectivity to the temporal behavior of a network in which the nodes are (real or complex)…

Dynamical Systems · Mathematics 2016-04-19 Anca Radulescu , Ariel Pignatelli

Learning the dynamics of complex systems features a large number of applications in data science. Graph-based modeling and inference underpins the most prominent family of approaches to learn complex dynamics due to their ability to capture…

Signal Processing · Electrical Eng. & Systems 2018-07-06 Luis M. Lopez-Ramos , Daniel Romero , Bakht Zaman , Baltasar Beferull-Lozano

Temporal networks, i.e., networks in which the interactions among a set of elementary units change over time, can be modelled in terms of time-varying graphs, which are time-ordered sequences of graphs over a set of nodes. In such graphs,…

Physics and Society · Physics 2013-06-04 Vincenzo Nicosia , John Tang , Cecilia Mascolo , Mirco Musolesi , Giovanni Russo , Vito Latora

With the growing amount of available temporal real-world network data, an important question is how to efficiently study these data. One can simply model a temporal network as either a single aggregate static network, or as a series of…

Social and Information Networks · Computer Science 2014-12-15 Yuriy Hulovatyy , Huili Chen , Tijana Milenkovic

Understanding the mutual interdependence between the behavior of dynamical processes on networks and the underlying topologies promises new insight for a large class of empirical networks. We present a generic approach to investigate this…

Disordered Systems and Neural Networks · Physics 2012-08-08 Steffen Karalus , Markus Porto

Networked systems are systems of interconnected components, in which the dynamics of each component are influenced by the behavior of neighboring components. Examples of networked systems include biological networks, critical…

Systems and Control · Computer Science 2016-06-01 Andrew Clark , Basel Alomair , Linda Bushnell , Radha Poovendran

Neuronal networks constitute a special class of dynamical systems, as they are formed by individual geometrical components, namely the neurons. In the existing literature, relatively little attention has been given to the influence of…

Neurons and Cognition · Quantitative Biology 2015-05-13 Sebastian Ahnert , Luciano da Fontoura Costa
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