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Motivation: The comparison of diverse genomic datasets is fundamental to understanding genome biology. Researchers must explore many large datasets of genome intervals (e.g., genes, sequence alignments) to place their experimental results…

Genomics · Quantitative Biology 2012-08-20 Ryan M. Layer , Kevin Skadron , Gabriel Robins , Ira M. Hall , Aaron R. Quinlan

Fingerprint recognition requires a minimal effort from the user, does not capture other information than strictly necessary for the recognition process, and provides relatively good performance. A critical step in fingerprint identification…

Computer Vision and Pattern Recognition · Computer Science 2014-02-21 Amira Mohammad Abdel-Mawgoud Saleh

De novo genome assembly, i.e., rebuilding the sequence of an unknown genome from redundant and erroneous short sequences, is a key but computationally intensive step in many genomics pipelines. The exponential growth of genomic data is…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-07-12 Giulia Guidi , Gabriel Raulet , Daniel Rokhsar , Leonid Oliker , Katherine Yelick , Aydin Buluc

Palmprint is one of the most useful physiological biometrics that can be used as a powerful means in personal recognition systems. The major features of the palmprints are palm lines, wrinkles and ridges, and many approaches use them in…

Computer Vision and Pattern Recognition · Computer Science 2015-06-25 Shervin Minaee , AmirAli Abdolrashidi

Background: Advances in high throughput sequencing technologies provide a huge number of genomes to be analyzed. Thus, computational methods play a crucial role in analyzing and extracting knowledge from the data generated. Investigating…

A common approach to the de novo molecular generation problem from mass spectra involves a two-stage pipeline: (1) encoding mass spectra into molecular fingerprints, followed by (2) decoding these fingerprints into molecular structures. In…

Machine Learning · Computer Science 2025-11-04 Neng Kai Nigel Neo , Lim Jing , Ngoui Yong Zhau Preston , Koh Xue Ting Serene , Bingquan Shen

Compared to contact fingerprint images, contactless fingerprint images exhibit four distinct characteristics: (1) they contain less noise; (2) they have fewer discontinuities in ridge patterns; (3) the ridge-valley pattern is less distinct;…

Computer Vision and Pattern Recognition · Computer Science 2024-08-20 Mahrukh Siddiqui , Shahzaib Iqbal , Bandar AlShammari , Bandar Alhaqbani , Tariq M. Khan , Imran Razzak

Identification of functional elements of a genome often requires dividing a sequence of measurements along a genome into segments differing from adjacent segments. In many applications, the mean of the measured values at multiple genomic…

Applications · Statistics 2015-06-30 S. B. Girimurugan , Jonathan Dennis , Jinfeng Zhang

Motivation: Computational methods are essential to extract actionable information from raw sequencing data, and to thus fulfill the promise of next-generation sequencing technology. Unfortunately, computational tools developed to call…

Recent breakthroughs and rapid integration of generative models (GMs) have sparked interest in the problem of model attribution and their fingerprints. For instance, service providers need reliable methods of authenticating their models to…

Machine Learning · Computer Science 2025-10-29 Hae Jin Song , Laurent Itti

One of the most challenging problems in fingerprint recognition continues to be establishing the identity of a suspect associated with partial and smudgy fingerprints left at a crime scene (i.e., latent prints or fingermarks). Despite the…

Computer Vision and Pattern Recognition · Computer Science 2023-09-11 Steven A. Grosz , Anil K. Jain

Contactless fingerprint has gained lots of attention in recent fingerprint studies. However, most existing contactless fingerprint algorithms treat contactless fingerprints as 2D plain fingerprints, and still utilize traditional…

Computer Vision and Pattern Recognition · Computer Science 2025-11-11 Yuwei Jia , Siyang Zheng , Fei Feng , Zhe Cui , Fei Su

We now need more than ever to make genome analysis more intelligent. We need to read, analyze, and interpret our genomes not only quickly, but also accurately and efficiently enough to scale the analysis to population level. There currently…

Advances in genome sequencing technologies generate massive amounts of sequence data that are increasingly analyzed and shared through public repositories. On-demand infrastructure services on cloud computing platforms enable the processing…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-20 Junseok Park , Eduardo A. Maury , Changhoon Oh , Donghoon Shin , Danielle Denisko , Eunjung Alice Lee

Fingerprint recognition systems have been deployed globally in numerous applications including personal devices, forensics, law enforcement, banking, and national identity systems. For these systems to be socially acceptable and…

Computer Vision and Pattern Recognition · Computer Science 2022-05-20 Akash Godbole , Steven A. Grosz , Karthik Nandakumar , Anil K. Jain

De novo genome assembly is challenging in highly repetitive regions; however, reference-guided assemblers often suffer from bias. We propose a framework for pangenome-guided sequence assembly, which can resolve short-read data in complex…

Quantum Physics · Physics 2026-02-11 Josh Cudby , James Bonfield , Chenxi Zhou , Richard Durbin , Sergii Strelchuk

Advances in Artificial Intelligence and Image Processing are changing the way people interacts with digital images and video. Widespread mobile apps like FACEAPP make use of the most advanced Generative Adversarial Networks (GAN) to produce…

Computer Vision and Pattern Recognition · Computer Science 2020-09-14 Luca Guarnera , Oliver Giudice , Sebastiano Battiato

With the growing demand for hand hygiene and convenience of use, palmprint recognition with touchless manner made a great development recently, providing an effective solution for person identification. Despite many efforts that have been…

Computer Vision and Pattern Recognition · Computer Science 2021-12-14 Zhaoqun Li , Xu Liang , Dandan Fan , Jinxing Li , Wei Jia , David Zhang

Plastid genomes (plastomes) of angiosperms are of great interest among biologists. High-throughput sequencing is making many such genomes accessible, increasing the need for tools to perform rapid comparative analysis. This exploratory…

Genomics · Quantitative Biology 2023-10-31 Richa Jayanti , Andrew Kim , Sean Pham , Athreya Raghavan , Anish Sharma , Manoj P. Samanta

The fall of prices of the high-throughput genome sequencing changes the landscape of modern genomics. A number of large scale projects aimed at sequencing many human genomes are in progress. Genome sequencing also becomes an important aid…

Data Structures and Algorithms · Computer Science 2017-03-03 Sebastian Deorowicz , Agnieszka Danek , Marcin Niemiec
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