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In this article, we revisit and expand our prior work on graph similarity. As with our earlier work, we focus on a view of similarity which does not require node correspondence between graphs under comparison. Our work is suited to the…

Discrete Mathematics · Computer Science 2025-12-10 Pierre Miasnikof , Alexander Y. Shetopaloff

As it follows from G\"odel's incompleteness theorems, any consistent formal system of axioms and rules of inference should imply a true unprovable statement. Actually, this fundamental principle can be efficiently applicable in…

Data Structures and Algorithms · Computer Science 2020-11-25 Roman Galay , Daniil Kalistratov

We present the first parallel fixed-parameter algorithm for subgraph isomorphism in planar graphs, bounded-genus graphs, and, more generally, all minor-closed graphs of locally bounded treewidth. Our randomized low depth algorithm has a…

Data Structures and Algorithms · Computer Science 2020-07-03 Lukas Gianinazzi , Torsten Hoefler

Graph Neural Networks (GNNs) require a large number of labeled graph samples to obtain good performance on the graph classification task. The performance of GNNs degrades significantly as the number of labeled graph samples decreases. To…

Machine Learning · Computer Science 2023-09-20 Abdullah Alchihabi , Yuhong Guo

The graph isomorphism problem asks whether two graphs are identical up to vertex relabeling. While the exact problem admits quasi-polynomial-time classical algorithms, many applications in molecular comparison, noisy network analysis, and…

Quantum Physics · Physics 2026-03-31 Prateek P. Kulkarni

Graph neural networks (GNNs) and message passing neural networks (MPNNs) have been proven to be expressive for subgraph structures in many applications. Some applications in heterogeneous graphs require explicit edge modeling, such as…

Machine Learning · Computer Science 2021-12-17 Xin Liu , Yangqiu Song

It is unknown whether two graphs can be tested for isomorphism in polynomial time. A classical approach to the Graph Isomorphism Problem is the d-dimensional Weisfeiler-Lehman algorithm. The d-dimensional WL-algorithm can distinguish many…

Combinatorics · Mathematics 2010-12-10 Harm Derksen

Twin-width is a newly introduced graph width parameter that aims at generalizing a wide range of "nicely structured" graph classes. In this work, we focus on obtaining good bounds on twin-width $\text{tww}(G)$ for graphs $G$ from a number…

Discrete Mathematics · Computer Science 2022-01-25 Hugo Jacob , Marcin Pilipczuk

The problem Simultaneous Embedding with Fixed Edges (SEFE) asks for two planar graph $G^1 = (V^1, E^1)$ and $G^2 = (V^2, E^2)$ sharing a common subgraph $G = G^1 \cap G^2$ whether they admit planar drawings such that the common graph is…

Data Structures and Algorithms · Computer Science 2015-06-22 Thomas Bläsius , Ignaz Rutter

This paper presents the novel `uniqueness tree' algorithm, as one possible method for determining whether two finite, undirected graphs are isomorphic. We prove that the algorithm has polynomial time complexity in the worst case, and that…

Discrete Mathematics · Computer Science 2016-06-22 Jonathan Gorard

The Graph Isomorphism problem has both theoretical and practical interest. In this paper we present an algorithm, called conauto-1.2, that efficiently tests whether two graphs are isomorphic, and finds an isomorphism if they are. This…

Data Structures and Algorithms · Computer Science 2011-06-23 Jose Luis Lopez-Presa , Antonio Fernandez Anta

The graph isomorphism is to determine whether two graphs are isomorphic. A closely related problem is automorphism detection, where an isomorphism between two graphs is a bijection between their vertex sets that preserves adjacency, and an…

Social and Information Networks · Computer Science 2019-11-18 Can Lu , Jeffrey Xu Yu , Zhiwei Zhang , Hong Cheng

Graph Neural Networks (GNNs) have achieved much success on graph-structured data. In light of this, there have been increasing interests in studying their expressive power. One line of work studies the capability of GNNs to approximate…

Machine Learning · Computer Science 2023-02-14 Zhengdao Chen , Soledad Villar , Lei Chen , Joan Bruna

Let $G$ be a graph with adjacency matrix $A(G)$ and degree matrix $D(G)$, and let $L_\mu(G):=A(G)-\mu D(G)$. Two graphs $G_1$ and $G_2$ are called \emph{degree-similar} if there exists an invertible matrix $M$ such that $M^{-1} A(G_1) M…

Combinatorics · Mathematics 2025-09-03 Yi-Zheng Fan , Ruo-Jie Xing , Yi-Liu Zhang , Wei Wang

Graph neural networks (GNNs) are among the most powerful tools in deep learning. They routinely solve complex problems on unstructured networks, such as node classification, graph classification, or link prediction, with high accuracy.…

Machine Learning · Computer Science 2023-08-21 Maciej Besta , Torsten Hoefler

Graph similarity is critical in graph-related tasks such as graph retrieval, where metrics like maximum common subgraph (MCS) and graph edit distance (GED) are commonly used. However, exact computations of these metrics are known to be…

Machine Learning · Computer Science 2025-10-02 Zhouyang Liu , Yixin Chen , Ning Liu , Jiezhong He , Dongsheng Li

Partial duality generalizes the fundamental concept of the geometric dual of an embedded graph. A partial dual is obtained by forming the geometric dual with respect to only a subset of edges. While geometric duality preserves the genus of…

Combinatorics · Mathematics 2013-11-18 Iain Moffatt

Determining whether two STRIPS planning instances are isomorphic is the simplest form of comparison between planning instances. It is also a particular case of the problem concerned with finding an isomorphism between a planning instance…

Artificial Intelligence · Computer Science 2024-06-25 Arnaud Lequen , Martin C. Cooper , Frédéric Maris

We study the problem of determining whether a given graph~$G=(V,E)$ admits a matching~$M$ whose removal destroys all odd cycles of~$G$ (or equivalently whether~$G-M$ is bipartite). This problem is equivalent to determine whether~$G$ admits…

Discrete Mathematics · Computer Science 2019-06-12 Carlos V. G. C. Lima , Dieter Rautenbach , Uéverton S. Souza , Jayme L. Szwarcfiter

Let $B=(X,Y,E)$ be a bipartite graph. A half-square of $B$ has one color class of $B$ as vertex set, say $X$; two vertices are adjacent whenever they have a common neighbor in $Y$. Every planar graph is a half-square of a planar bipartite…

Discrete Mathematics · Computer Science 2018-04-18 Hoang-Oanh Le , Van Bang Le