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Finding a suitable data representation for a specific task has been shown to be crucial in many applications. The success of subspace clustering depends on the assumption that the data can be separated into different subspaces. However,…

Computer Vision and Pattern Recognition · Computer Science 2021-06-21 Zhengrui Ma , Zhao Kang , Guangchun Luo , Ling Tian

We introduce De Bruijn Graph Neural Networks (DBGNNs), a novel time-aware graph neural network architecture for time-resolved data on dynamic graphs. Our approach accounts for temporal-topological patterns that unfold in the causal topology…

Machine Learning · Computer Science 2022-09-20 Lisi Qarkaxhija , Vincenzo Perri , Ingo Scholtes

Incremental graph learning has gained significant attention for its ability to address the catastrophic forgetting problem in graph representation learning. However, traditional methods often rely on a large number of labels for node…

Machine Learning · Computer Science 2024-11-12 Dong Li , Aijia Zhang , Junqi Gao , Biqing Qi

In this paper, we consider nonsubsampled graph filter banks (NSGFBs) to process data on a graph in a distributed manner. Given an analysis filter bank with small bandwidth, we propose algebraic and optimization methods of constructing…

Information Theory · Computer Science 2017-09-14 Junzheng Jiang , Cheng Cheng , Qiyu Sun

We present a new distributed algorithm for state space minimization modulo branching bisimulation. Like its predecessor it uses signatures for refinement, but the refinement process and the signatures have been optimized to exploit the fact…

Logic in Computer Science · Computer Science 2009-12-15 Stefan Blom , Jaco van de Pol

Pangenomes serve as a framework for joint analysis of genomes of related organisms. Several pangenome models were proposed, offering different functionalities, applications provided by available tools, their efficiency etc. Among them, two…

Genomics · Quantitative Biology 2025-03-20 Adam Cicherski , Norbert Dojer

Learned Bloom Filters, i.e., models induced from data via machine learning techniques and solving the approximate set membership problem, have recently been introduced with the aim of enhancing the performance of standard Bloom Filters,…

Machine Learning · Computer Science 2022-11-29 Dario Malchiodi , Davide Raimondi , Giacomo Fumagalli , Raffaele Giancarlo , Marco Frasca

Convolutional graph networks are used in particle physics for effective event reconstructions and classifications. However, their performances can be limited by the considerable amount of sensors used in modern particle detectors if applied…

High Energy Physics - Experiment · Physics 2022-10-10 M. Bachlechner , T. Birkenfeld , P. Soldin , A. Stahl , C. Wiebusch

Graph Convolutional Networks (GCNs) are widely used in graph-based applications, such as social networks and recommendation systems. Nevertheless, large-scale graphs or deep aggregation layers in full-batch GCNs consume significant GPU…

Machine Learning · Computer Science 2024-10-15 Shengwei Ji , Yujie Tian , Fei Liu , Xinlu Li , Le Wu

Max-k-Cut and correlation clustering are fundamental graph partitioning problems. For a graph with G=(V,E) with n vertices, the methods with the best approximation guarantees for Max-k-Cut and the Max-Agree variant of correlation clustering…

Optimization and Control · Mathematics 2021-10-28 Nimita Shinde , Vishnu Narayanan , James Saunderson

We study the problem of clustering nodes in a dynamic graph, where the connections between nodes and nodes' cluster memberships may change over time, e.g., due to community migration. We first propose a dynamic stochastic block model that…

Machine Learning · Computer Science 2021-06-24 Yuhang Yao , Carlee Joe-Wong

Knowledge graphs have been shown to play an important role in recent knowledge mining and discovery, for example in the field of life sciences or bioinformatics. Although a lot of research has been done on the field of query optimization,…

Databases · Computer Science 2023-06-13 Jens Dörpinghaus , Andreas Stefan

Variation graphs, which represent genetic variation within a population, are replacing sequences as reference genomes. Path indexes are one of the most important tools for working with variation graphs. They generalize text indexes to…

Data Structures and Algorithms · Computer Science 2017-01-13 Jouni Sirén

Gaussian boson sampling (GBS) is not only a feasible protocol for demonstrating quantum computational advantage, but also mathematically associated with certain graph-related and quantum chemistry problems. In particular, it is proposed…

Filters are fundamental in extracting information from data. For time series and image data that reside on Euclidean domains, filters are the crux of many signal processing and machine learning techniques, including convolutional neural…

Signal Processing · Electrical Eng. & Systems 2024-02-21 Elvin Isufi , Fernando Gama , David I. Shuman , Santiago Segarra

A quotient filter is a cache efficient AMQ data structure. Depending on the fill degree of the filter most insertions and queries only need to access one or two consecutive cache lines. This makes quotient filters fast compared to the more…

Data Structures and Algorithms · Computer Science 2019-11-20 Tobias Maier , Peter Sanders , Robert Williger

Graph algorithms play an important role in many computer science areas. In order to solve problems that can be modeled using graphs, it is necessary to use a data structure that can represent those graphs in an efficient manner. On top of…

Mathematical Software · Computer Science 2023-08-22 Cristian Frăsinaru , Emanuel Florentin Olariu

Counting triangles in a graph and incident to each vertex is a fundamental and frequently considered task of graph analysis. We consider how to efficiently do this for huge graphs using massively parallel distributed-memory machines.…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-24 Peter Sanders , Tim Niklas Uhl

Proposing an effective and flexible matrix to represent a graph is a fundamental challenge that has been explored from multiple perspectives, e.g., filtering in Graph Fourier Transforms. In this work, we develop a novel and general…

Machine Learning · Computer Science 2023-05-11 Mingqi Yang , Wenjie Feng , Yanming Shen , Bryan Hooi

Graph clustering involves the task of dividing nodes into clusters, so that the edge density is higher within clusters as opposed to across clusters. A natural, classic and popular statistical setting for evaluating solutions to this…

Machine Learning · Statistics 2016-11-17 Yudong Chen , Sujay Sanghavi , Huan Xu
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