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We study the transport of bacteria in a porous media modeled by a square channel containing one cylindrical obstacle via molecular dynamics simulations coupled to a lattice Boltzmann fluid. Our bacteria model is a rod-shaped rigid body…

Soft Condensed Matter · Physics 2020-11-30 Miru Lee , Christoph Lohrmann , Kai Szuttor , Harold Auradou , Christian Holm

A simple model of an active colloid consisting of dumbbell-shaped particles that cyclically change their length without propelling themselves is proposed and analyzed. At nanoscales, it represents an idealization for bacterial cytoplasm or…

Adaptation and Self-Organizing Systems · Physics 2020-01-28 Yuki Koyano , Hiroyuki Kitahata , Alexander S. Mikhailov

We study numerically the hydrodynamics of a self-propelled particle system, consisting of spherical squirmers sedimented on a flat surface. We observe the emergence of dynamic structures, due to the interplay of particle-particle and…

Soft Condensed Matter · Physics 2019-12-20 Zaiyi Shen , Juho S. Lintuvuori

Suspensions of self-propelled particles, such as swimming micro-organisms, are known to undergo complex dynamics as a result of hydrodynamic interactions. This fluid dynamics video presents a numerical simulation of such a suspension, based…

Fluid Dynamics · Physics 2009-10-20 David Saintillan , Amir Alizadeh Pahlavan

We study the two-dimensional motion of a self-propelling asymmetric bent rod. By employing slender body theory and the Lorentz reciprocal theorem, we determine particle trajectories for different geometric configurations and arbitrary…

Fluid Dynamics · Physics 2022-10-21 Arkava Ganguly , Ankur Gupta

Various challenges are faced when animalcules such as bacteria, protozoa, algae, or sperms move autonomously in aqueous media at low Reynolds number. These active agents are subject to strong stochastic fluctuations, that compete with the…

Soft Condensed Matter · Physics 2017-01-16 Christina Kurzthaler , Sebastian Leitmann , Thomas Franosch

We theoretically and computationally study the low-Reynolds-number hydrodynamics of a linear active microswimmer surfing on a compressible thin fluid layer characterized by an odd viscosity. Since the underlying three-dimensional fluid is…

Soft Condensed Matter · Physics 2023-10-25 Yuto Hosaka , Ramin Golestanian , Abdallah Daddi-Moussa-Ider

Describing the phenomena of the surrounding world is an interesting task that has long attracted the attention of scientists. However, even in seemingly simple phenomena, complex dynamics can be revealed. In particular, leaves on the…

Dynamical Systems · Mathematics 2022-02-10 Elizaveta M. Artemova , Evgeny V. Vetchanin

Understanding the stochastic dynamics of tracer particles in active fluids is important for identifying the physical properties of flow generating objects such as colloids, bacteria or algae. Here, we study both analytically and numerically…

Soft Condensed Matter · Physics 2010-10-12 Jörn Dunkel , Victor B. Putz , Irwin M. Zaid , Julia M. Yeomans

Here we implement microfabricated boomerang particles with unequal arm lengths as a model for non-symmetry particles and study their Brownian motion in a quasi-two dimensional geometry by using high precision single particle motion…

Soft Condensed Matter · Physics 2018-06-21 Ayan Chakrabarty , Andrew Konya , Feng Wang , Jonathan V. Selinger , Kai Sun , Qi-Huo Wei

Self-propelled active matter can exhibit vastly different behavior than systems with purely Brownian motion. In Eur. Phys. J. E 40, 23 (2017), Zeitz, Wolf, and Stark compared an active matter particle with a Brownian particle moving in a…

Soft Condensed Matter · Physics 2026-03-06 C. Reichhardt , C. J. O. Reichhardt

Starting from the many-particle Smoluchowski equation, we derive dynamical density functional theory for Brownian particles with an arbitrary shape. Both passive and active (self-propelled) particles are considered. The resulting theory…

Soft Condensed Matter · Physics 2014-01-28 Raphael Wittkowski , Hartmut Löwen

In biological systems, microswimmers often propel themselves through complex media. However, many aspects of swimming mechanisms in non-Newtonian fluids remain unclear. This study considers the propulsion of two types of single spherical…

Fluid Dynamics · Physics 2024-10-14 Takuya Kobayashi , Ryoichi Yamamoto

Using a 3D Lagrangian tracking technique, we determine experimentally the trajectories of non-tumbling E. coli mutants swimming in a Poiseuille flow. We identify a typology of trajectories in agreement with a kinematic "active…

We synthesize colloidal particles with various anisotropic shapes and track their orientationally resolved Brownian trajectories using confocal microscopy. An analysis of appropriate short-time correlation functions provides direct access…

Soft Condensed Matter · Physics 2014-01-28 Daniela J. Kraft , Raphael Wittkowski , Borge ten Hagen , Kazem V. Edmond , David J. Pine , Hartmut Löwen

We consider an Individual-Based Model for self-rotating particles interacting through local alignment and investigate its macroscopic limit. This model describes self-propelled particles moving in the plane and trying to synchronize their…

Mathematical Physics · Physics 2013-06-17 Pierre Degond , Giacomo Dimarco , Thi Bich Ngoc Mac

Locomotion of bacteria by actin polymerization, and in vitro motion of spherical beads coated with a protein catalyzing polymerization, are examples of active motility. Starting from a simple model of forces locally normal to the surface of…

Statistical Mechanics · Physics 2009-11-10 Allen Lee , Ha Youn Lee , Mehran Kardar

We investigate a self-organized swimmer at low Reynolds numbers. The microscopic swimmer is composed of three spheres that are connected by two identical active linker arms. Each linker arm contains molecular motors and elastic elements and…

Biological Physics · Physics 2009-09-30 Stefan Gunther , Karsten Kruse

We study the detention statistics of self-propelling droplet microswimmers attaching to microfluidic pillars. These droplets show negative autochemotaxis: they shed a persistent repulsive trail of spent fuel that biases them to detach from…

Soft Condensed Matter · Physics 2019-10-30 Chenyu Jin , Jérémy Vachier , Soumya Bandyopadhyay , Tamara Macharashvili , Corinna C. Maass

We investigate exploration patterns of a microswimmer, modeled as an active Brownian particle, searching for a target region located in a well of an energy landscape and separated from the initial position of the particle by high barriers.…

Soft Condensed Matter · Physics 2021-09-02 Luigi Zanovello , Pietro Faccioli , Thomas Franosch , Michele Caraglio
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