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We demonstrate 'differential dynamic microscopy' (DDM) for the fast, high throughput characterization of the dynamics of active particles. Specifically, we characterize the swimming speed distribution and the fraction of motile cells in…

Quantitative Methods · Quantitative Biology 2011-07-12 Laurence G. Wilson , Vincent A. Martinez , Jana Schwarz-Linek , J. Tailleur , Peter N. Pusey , Gary Bryant , Wilson C. K. Poon

Sedimentation in active fluids has come into focus due to the ubiquity of swimming micro-organisms in natural and artificial environments. Here, we experimentally investigate sedimentation of passive particles in water containing various…

Fluid Dynamics · Physics 2017-10-12 Jaspreet Singh , Alison E. Patteson , Prashant K. Purohit , Paulo E. Arratia

Sedimentation in active fluids has come into focus due to the ubiquity of swimming micro-organisms in natural and industrial processes. Here, we investigate sedimentation dynamics of passive particles in a fluid as a function of bacteria E.…

Although the motility of the flagellated bacteria, Escherichia coli, has been widely studied, the effect of viscosity on swimming speed remains controversial. The swimming mode of wild-type E.coli is often idealized as a "run-and- tumble"…

Biological Physics · Physics 2018-05-09 Zijie Qu , Fatma Zeynep Temel , Rene Henderikx , Kenneth S. Breuer

The locomotion of swimming bacteria in simple Newtonian fluids can successfully be described within the framework of low Reynolds number hydrodynamics. The presence of polymers in biofluids generally increases the viscosity, which is…

Soft Condensed Matter · Physics 2019-08-12 Andreas Zöttl , Julia M. Yeomans

Active matter comprised of self-propelled interacting units holds a major promise for extraction of useful work from its seemingly chaotic out-of-equilibrium dynamics. Streamlining active matter to produce work is especially important at…

Soft Condensed Matter · Physics 2021-03-17 Mojtaba Rajabi , Hend Baza , Taras Turiv , Oleg D. Lavrentovich

We study the dynamics and interaction of two swimming bacteria, modeled by self-propelled dumbbell-type structures. We focus on alignment dynamics of a coplanar pair of elongated swimmers, which propel themselves either by pushing" or…

Analysis of PDEs · Mathematics 2008-11-24 Vitaliy Gyrya , Igor S. Aranson , Leonid V. Berlyand , Dmitry Karpeev

Collective motion is a phenomenon observed across length scales in nature, from bacterial swarming and tissue migration to the flocking of animals. The mechanisms underlying this behavior vary significantly depending on the biological…

Soft Condensed Matter · Physics 2025-01-15 Urvi Mahendra Bora , Mohd Suhail Rizvi

The study of active matter system has critical importance in revealing the physical essence of biological collective behavior. Dense bacterial suspension - a typical biological active matter, exhibits a wide range of phenomenons, among…

Soft Condensed Matter · Physics 2025-11-04 Hongyi Bian , Chunhe Li , Zixiang Lin , Jin Zhu , Weijie Chen , Gaojin Li , Yongxiang Huang , Zijie Qu

Fluid turbulence is commonly associated with stronger drag, greater heat transfer, and more efficient mixing than in laminar flows. In many natural and industrial settings, turbulent liquid flows contain suspensions of dispersed bubbles and…

Fluid Dynamics · Physics 2020-05-29 Varghese Mathai , Detlef Lohse , Chao Sun

Dense bacterial suspensions display collective motion exhibiting coherent flow structures reminiscent of turbulent flows. In contrast to inertial turbulence, understanding the microscopic dynamics of bacterial fluid elements undergoing…

Soft Condensed Matter · Physics 2023-07-28 G. Dhananjay , M. Hemlata , Saravanan Matheshwaran , Sivasurender Chandran

Bacterial assemblies exhibit rich collective behaviors that control their biological functions, making them a relevant object of study from an active matter physics perspective. Dense bacterial suspensions self-organize into distinct…

Soft Condensed Matter · Physics 2025-04-08 Martin Maliet , Nicolas Fix-Boulier , Ludovic Berthier , Maxime Deforet

Exploiting the "natural" frame of space curves, we formulate an intrinsic dynamics of twisted elastic filaments in viscous fluids. A pair of coupled nonlinear equations describing the temporal evolution of the filament's complex curvature…

Soft Condensed Matter · Physics 2009-10-31 Raymond E. Goldstein , Thomas R. Powers , Chris H. Wiggins

We study the spreading of a bacterial colony undergoing turbulent like collective motion. We present two minimalistic models to investigate the interplay between population growth and coherent structures arising from turbulence. Using…

Fluid Dynamics · Physics 2017-04-06 Rayan Chatterjee , Abhijeet A. Joshi , Prasad Perlekar

Active systems comprised of self-propelled units show fascinating transitions from Brownian-like dynamics to collective coherent motion. Swirling of swimming bacteria is a spectacular example. This study demonstrates that a nematic liquid…

We investigate the effect of cooperative interactions in an ensemble of microorganisms, modelled as self-propelled disk-like and rod-like particles, in a three-dimensional turbulent flow to show flocking as an emergent phenomenon. Building…

Soft Condensed Matter · Physics 2020-05-20 Anupam Gupta , Amal Roy , Arnab Saha , Samriddhi Sankar Ray

The intricate wobbling motion of flagellated bacteria, characterized by the periodic precession of the cell body, is a determinant factor in their motility and navigation within complex fluid environments. While well-studied in quiescent…

Soft Condensed Matter · Physics 2026-01-26 Wei Feng , Fanglong Dang , Hao Luo , Alan C. H. Tsang , Yanan Liu , Guangyin Jing

In natural environments, solid surfaces present both opportunities and challenges for bacteria. On one hand, they serve as platforms for biofilm formation, crucial for bacterial colonization and resilience in harsh conditions. On the other…

Biological Physics · Physics 2025-07-01 Antai Tao , Guangzhe Liu , Rongjing Zhang , Junhua Yuan

Active turbulence arises typically in systems ranging from microorganisms and biopolymers to synthetic colloids, where chaotic flows are closely associated with motile topological defects in collectively swarming suspensions. Here, we…

Soft Condensed Matter · Physics 2026-04-27 Prince Vibek Baruah , Nadia Bihari Padhan , Biswajit Maji , Rahul Pandit , Prerna Sharma

Flagellar-driven locomotion plays a critical role in bacterial attachment and colonization of surfaces, contributing to the risks of contamination and infection. Tremendous attempts to uncover the underlying principles governing bacterial…

Soft Condensed Matter · Physics 2025-02-19 Xin-Xin Xu , Yangguang Tian , Yuhe Pu , Bingchen Che , Hao Luo , Yanan Liu , Yan-Jun Liu , Guangyin Jing