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Contagion processes are strongly linked to the network structures on which they propagate, and learning these structures is essential for understanding and intervention on complex network processes such as epidemics and (mis)information…

Social and Information Networks · Computer Science 2019-08-12 Caitlin Gray , Lewis Mitchell , Matthew Roughan

Any network studied in the literature is inevitably just a sampled representative of its real-world analogue. Additionally, network sampling is lately often applied to large networks to allow for their faster and more efficient analysis.…

Social and Information Networks · Computer Science 2015-04-14 Neli Blagus , Lovro Šubelj , Gregor Weiss , Marko Bajec

Automated analysis of imaged phenotypes enables fast and reproducible quantification of biologically relevant features. Despite recent developments, recordings of complex, networked structures, such as: leaf venation patterns, cytoskeletal…

Quantitative Methods · Quantitative Biology 2017-06-01 David Breuer , Zoran Nikoloski

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

Artificial Intelligence · Computer Science 2020-09-01 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

The structure of a Bayesian network includes a great deal of information about the probability distribution of the data, which is uniquely identified given some general distributional assumptions. Therefore it's important to study its…

Methodology · Statistics 2011-12-07 Marco Scutari

Learning the structure of dependence relations between variables is a pervasive issue in the statistical literature. A directed acyclic graph (DAG) can represent a set of conditional independences, but different DAGs may encode the same set…

Methodology · Statistics 2021-02-15 Federico Castelletti , Stefano Peluso

Bayesian inference of Bayesian network structures is often performed by sampling directed acyclic graphs along an appropriately constructed Markov chain. We present two techniques to improve sampling. First, we give an efficient…

Machine Learning · Computer Science 2025-10-30 Daniele Nikzad , Alexander Zhilkin , Juha Harviainen , Jack Kuipers , Giusi Moffa , Mikko Koivisto

Bayesian networks are a versatile and powerful tool to model complex phenomena and the interplay of their components in a probabilistically principled way. Moving beyond the comparatively simple case of completely observed, static data,…

Methodology · Statistics 2020-11-04 Marco Scutari

Current Bayesian net representations do not consider structure in the domain and include all variables in a homogeneous network. At any time, a human reasoner in a large domain may direct his attention to only one of a number of natural…

Artificial Intelligence · Computer Science 2013-03-25 Yang Xiang , David L. Poole , Michael P. Beddoes

Networks representing complex systems in nature and society usually involve multiple interaction types. These types suggest essential information on the interactions between components, but not all of the existing types are usually…

Physics and Society · Physics 2021-04-27 Wenjie Jia , Manuel S. Mariani , Linyuan Lü , Tao Jiang

Bayesian network structures are usually built using only the data and starting from an empty network or from a naive Bayes structure. Very often, in some domains, like medicine, a prior structure knowledge is already known. This structure…

Artificial Intelligence · Computer Science 2014-06-11 Ezilda Almeida , Pedro Ferreira , Tiago Vinhoza , Inês Dutra , Jingwei Li , Yirong Wu , Elizabeth Burnside

The continuous-time Bayesian networks (CTBNs) represent a class of stochastic processes, which can be used to model complex phenomena, for instance, they can describe interactions occurring in living processes, in social science models or…

Machine Learning · Statistics 2020-06-16 Maryia Shpak , Błażej Miasojedow , Wojciech Rejchel

Mechanistic models can provide an intuitive and interpretable explanation of network growth by specifying a set of generative rules. These rules can be defined by domain knowledge about real-world mechanisms governing network growth or may…

Social and Information Networks · Computer Science 2025-12-04 Maxwell H Wang , Till Hoffmann , Jukka-Pekka Onnela

This paper shows how information about the network's community structure can be used to define node features with high predictive power for classification tasks. To do so, we define a family of community-aware node features and investigate…

Social and Information Networks · Computer Science 2024-04-29 Bogumił Kamiński , Paweł Prałat , François Théberge , Sebastian Zając

We present a lightweight network that infers grouping and boundaries, including curves, corners and junctions. It operates in a bottom-up fashion, analogous to classical methods for sub-pixel edge localization and edge-linking, but with a…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Mia Gaia Polansky , Charles Herrmann , Junhwa Hur , Deqing Sun , Dor Verbin , Todd Zickler

Dependency networks (Heckerman et al., 2000) are potential probabilistic graphical models for systems comprising a large number of variables. Like Bayesian networks, the structure of a dependency network is represented by a directed graph,…

Machine Learning · Computer Science 2021-07-05 Kazuya Takabatake , Shotaro Akaho

Heterogeneous nature of real networks implies that different edges play different roles in network structure and functions, and thus to identify significant edges is of high value in both theoretical studies and practical applications. We…

Physics and Society · Physics 2020-05-20 Na Zhao , Jie Li , Jian Wang , Tong Li , Yong Yu , Tao Zhou

We study the problem of learning Bayesian network structures from data. We develop an algorithm for finding the k-best Bayesian network structures. We propose to compute the posterior probabilities of hypotheses of interest by Bayesian…

Machine Learning · Computer Science 2012-03-19 Jin Tian , Ru He , Lavanya Ram

We consider Bayesian analysis of a class of multiple changepoint models. While there are a variety of efficient ways to analyse these models if the parameters associated with each segment are independent, there are few general approaches…

Computation · Statistics 2009-10-19 Paul Fearnhead , Zhen Liu

Characterizing the community structure of complex networks is a key challenge in many scientific fields. Very diverse algorithms and methods have been proposed to this end, many working reasonably well in specific situations. However, no…

Physics and Society · Physics 2013-01-01 Rodrigo Aldecoa , Ignacio Marín