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We discuss how string sorting algorithms can be parallelized on modern multi-core shared memory machines. As a synthesis of the best sequential string sorting algorithms and successful parallel sorting algorithms for atomic objects, we…

Data Structures and Algorithms · Computer Science 2013-05-07 Timo Bingmann , Peter Sanders

Given an LZW/LZ78 compressed text, we want to find an approximate occurrence of a given pattern of length m. The goal is to achieve time complexity depending on the size n of the compressed representation of the text instead of its length.…

Data Structures and Algorithms · Computer Science 2013-09-23 Pawel Gawrychowski , Damian Straszak

Mergesort is one of the few efficient sorting algorithms and, despite being the oldest one, often still the method of choice today. In contrast to some alternative algorithms, it always runs efficiently using O(n log n) element comparisons…

Data Structures and Algorithms · Computer Science 2025-09-30 Christian Siebert

In this paper we investigate the \emph{approximate string matching problem} when the allowed edit operations are \emph{non-overlapping unbalanced translocations of adjacent factors}. Such kind of edit operations take place when two adjacent…

Data Structures and Algorithms · Computer Science 2021-01-05 Domenico Cantone , Simone Faro , Arianna Pavone

Nearest neighbor search is a problem of finding the data points from the database such that the distances from them to the query point are the smallest. Learning to hash is one of the major solutions to this problem and has been widely…

Computer Vision and Pattern Recognition · Computer Science 2017-04-25 Jingdong Wang , Ting Zhang , Jingkuan Song , Nicu Sebe , Heng Tao Shen

Matching is one of the most fundamental and broadly applicable problems across many domains. In these diverse real-world applications, there is often a degree of uncertainty in the input which has led to the study of stochastic matching…

Data Structures and Algorithms · Computer Science 2026-04-21 Brian Brubach , Nathaniel Grammel , Will Ma , Calum MacRury , Aravind Srinivasan

Stochastic dynamic matching problems have recently gained attention in the stochastic-modeling community due to their diverse applications, such as supply-chain management and kidney exchange programs. In this paper, we study a matching…

Networking and Internet Architecture · Computer Science 2025-11-13 Céline Comte , Fabien Mathieu , Sushil Mahavir Varma , Ana Bušić

The problem of constructing optimal factoring automata arises in the context of unification factoring for the efficient execution of logic programs. Given an ordered set of $n$ strings of length $m$, the problem is to construct a trie-like…

Data Structures and Algorithms · Computer Science 2024-04-04 Thomas Erlebach , Kleitos Papadopoulos

Although real-world text datasets, such as DNA sequences, are far from being uniformly random, average-case string searching algorithms perform significantly better than worst-case ones in most applications of interest. In this paper, we…

Data Structures and Algorithms · Computer Science 2018-01-16 Lorraine A. K. Ayad , Panagiotis Charalampopoulos , Costas S. Iliopoulos , Solon P. Pissis

We consider the problem of encoding a string of length $n$ from an integer alphabet of size $\sigma$ so that access and substring equality queries (that is, determining the equality of any two substrings) can be answered efficiently. Any…

Data Structures and Algorithms · Computer Science 2020-05-12 Nicola Prezza

We propose a quantum algorithm for closest pattern matching which allows us to search for as many distinct patterns as we wish in a given string (database), requiring a query function per symbol of the pattern alphabet. This represents a…

Quantum Physics · Physics 2007-05-23 P. Mateus , Y. Omar

In this paper we present algorithms for a number of problems in geometric pattern matching where the input consist of a collections of segments in the plane. Our work consists of two main parts. In the first, we address problems and…

Computational Geometry · Computer Science 2007-05-23 Alon Efrat , Piotr Indyk , Suresh Venkatasubramanian

In his 1987 paper entitled "Generalized String Matching", Abrahamson introduced {\em pattern matching with character classes} and provided the first efficient algorithm to solve it. The best known solution to date is due to Linhart and…

Data Structures and Algorithms · Computer Science 2021-01-01 Alberto Apostolico , Péter L. Erdős , István Miklós , Johannes Siemons

In this paper we study a variant of string pattern matching which deals with tuples of strings known as \textit{multi-track strings}. Multi-track strings are a generalisation of strings (or \textit{single-track strings}) that have primarily…

Data Structures and Algorithms · Computer Science 2019-12-02 Carl Barton , Ewan Birney , Tomas Fitzgerald

We revisit the complexity of approximate pattern matching in an elastic-degenerate string. Such a string is a sequence of $n$ finite sets of strings of total length $N$, and compactly describes a collection of strings obtained by first…

Data Structures and Algorithms · Computer Science 2025-03-04 Paweł Gawrychowski , Adam Górkiewicz , Pola Marciniak , Solon P. Pissis , Karol Pokorski

The random access problem for compressed strings is to build a data structure that efficiently supports accessing the character in position $i$ of a string given in compressed form. Given a grammar of size $n$ compressing a string of size…

Data Structures and Algorithms · Computer Science 2015-01-27 Patrick Hagge Cording

We study the complexity of the problem of searching for a set of patterns that separate two given sets of strings. This problem has applications in a wide variety of areas, most notably in data mining, computational biology, and in…

Computational Complexity · Computer Science 2016-12-20 Giuseppe Lancia , Luke Mathieson , Pablo Moscato

We revisit classic string problems considered in the area of parameterized complexity, and study them through the lens of dynamic data structures. That is, instead of asking for a static algorithm that solves the given instance efficiently,…

Data Structures and Algorithms · Computer Science 2022-05-03 Jędrzej Olkowski , Michał Pilipczuk , Mateusz Rychlicki , Karol Węgrzycki , Anna Zych-Pawlewicz

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…

Data Structures and Algorithms · Computer Science 2016-12-07 Philip Bille , Inge Li Gørtz , Frederik Rye Skjoldjensen

Park et al. [TCS 2020] observed that the similarity between two (numerical) strings can be captured by the Cartesian trees: The Cartesian tree of a string is a binary tree recursively constructed by picking up the smallest value of the…

Data Structures and Algorithms · Computer Science 2022-04-18 Tsubasa Oizumi , Takeshi Kai , Takuya Mieno , Shunsuke Inenaga , Hiroki Arimura