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We consider the problem of dictionary matching in a stream. Given a set of strings, known as a dictionary, and a stream of characters arriving one at a time, the task is to report each time some string in our dictionary occurs in the…

Data Structures and Algorithms · Computer Science 2015-04-24 Raphael Clifford , Allyx Fontaine , Ely Porat , Benjamin Sach , Tatiana Starikovskaya

We consider document listing on string collections, that is, finding in which strings a given pattern appears. In particular, we focus on repetitive collections: a collection of size $N$ over alphabet $[1,\sigma]$ is composed of $D$ copies…

Data Structures and Algorithms · Computer Science 2018-11-15 Gonzalo Navarro

In this paper we describe a data structure that supports pattern matching queries on a dynamically arriving text over an alphabet ofconstant size. Each new symbol can be prepended to $T$ in O(1) worst-case time. At any moment, we can report…

Data Structures and Algorithms · Computer Science 2013-07-09 Gregory Kucherov , Yakov Nekrich

Given a pattern $P$ and a text $T$, both strings over a binary alphabet, the binary jumbled string matching problem consists in telling whether any permutation of $P$ occurs in $T$. The indexed version of this problem, i.e., preprocessing a…

Data Structures and Algorithms · Computer Science 2013-05-09 Emanuele Giaquinta , Szymon Grabowski

In this paper we revisit the classical regular expression matching problem, namely, given a regular expression $R$ and a string $Q$, decide if $Q$ matches one of the strings specified by $R$. Let $m$ and $n$ be the length of $R$ and $Q$,…

Data Structures and Algorithms · Computer Science 2007-05-23 Philip Bille

Two strings of the same length are said to Cartesian-tree match (CT-match) if their Cartesian-trees are isomorphic [Park et al., TCS 2020]. Cartesian-tree matching is a natural model that allows for capturing similarities of numerical…

Data Structures and Algorithms · Computer Science 2026-01-01 Taketo Tsujimoto , Yuki Yonemoto , Hiroki Shibata , Takuya Mieno , Yuto Nakashima , Shunsuke Inenaga

We investigate the problem of deterministic pattern matching in multiple streams. In this model, one symbol arrives at a time and is associated with one of s streaming texts. The task at each time step is to report if there is a new match…

Data Structures and Algorithms · Computer Science 2012-04-26 Raphael Clifford , Markus Jalsenius , Ely Porat , Benjamin Sach

We study algorithms for solving three problems on strings. The first one is the Most Frequently String Search Problem. The problem is the following. Assume that we have a sequence of $n$ strings of length $k$. The problem is finding the…

Quantum Physics · Physics 2020-01-08 Kamil Khadiev , Artem Ilikaev

We investigate the following problem: given a sample of classified strings, find a first-order sentence of minimal quantifier rank that is consistent with the sample. We represent strings as successor string structures, that is, finite…

Logic in Computer Science · Computer Science 2018-09-11 Thiago Alves Rocha , Ana Teresa Martins , Francicleber Martins Ferreira

We consider the classical exact multiple string matching problem. Our solution is based on $q$-grams combined with pattern superimposition, bit-parallelism and alphabet size reduction. We discuss the pros and cons of the various…

Data Structures and Algorithms · Computer Science 2021-12-07 Robert Susik , Szymon Grabowski , Kimmo Fredriksson

We study a new variant of the string matching problem called cross-document string matching, which is the problem of indexing a collection of documents to support an efficient search for a pattern in a selected document, where the pattern…

Data Structures and Algorithms · Computer Science 2012-06-21 Gregory Kucherov , Yakov Nekrich , Tatiana Starikovskaya

We study the following rearrangement problem: Given $n$ words, rearrange and concatenate them so that the obtained string is lexicographically smallest (or largest, respectively). We show that this problem reduces to sorting the given words…

Data Structures and Algorithms · Computer Science 2022-04-26 Ruixi Luo , Taikun Zhu , Kai Jin

String matching is the problem of finding all the substrings of a text which match a given pattern. It is one of the most investigated problems in computer science, mainly due to its very diverse applications in several fields. Recently,…

Data Structures and Algorithms · Computer Science 2017-07-04 Domenico Cantone , Simone Faro , Arianna Pavone

The Cartesian tree of a sequence captures the relative order of the sequence's elements. In recent years, Cartesian tree matching has attracted considerable attention, particularly due to its applications in time series analysis. Consider a…

Data Structures and Algorithms · Computer Science 2026-02-10 Panagiotis Charalampopoulos , Jonas Ellert , Manal Mohamed

Motivated by the imminent growth of massive, highly redundant genomic databases, we study the problem of compressing a string database while simultaneously supporting fast random access, substring extraction and pattern matching to the…

Data Structures and Algorithms · Computer Science 2012-11-01 Travis Gagie , Paweł Gawrychowski , Christopher Hoobin , Simon J. Puglisi

In this paper we present algorithms for several string problems in the Congested Clique model. In the Congested Clique model, $n$ nodes (computers) are used to solve some problem. The input to the problem is distributed among the nodes, and…

Data Structures and Algorithms · Computer Science 2025-04-14 Shay Golan , Matan Kraus

This article introduces a new optimization method to improve mergesort's runtime complexity, when sorting sequences that have equal keys to $O(n log_2 k)$, where $k$ is the number of distinct keys in the sequence. When $k$ is constant, it…

Data Structures and Algorithms · Computer Science 2020-12-17 Albert Tedja

We consider the problem of sorting $n$ elements subject to persistent random comparison errors. In this problem, each comparison between two elements can be wrong with some fixed (small) probability $p$, and comparing the same pair of…

Data Structures and Algorithms · Computer Science 2025-08-28 Barbara Geissmann , Stefano Leucci , Chih-Hung Liu , Paolo Penna

Searching for all occurrences of a pattern in a text is a fundamental problem in computer science with applications in many other fields, like natural language processing, information retrieval and computational biology. Sampled string…

Data Structures and Algorithms · Computer Science 2019-08-19 Simone Faro , Arianna Pavone , Francesco Pio Marino

In this work, we consider pattern matching variants in small space, that is, in the read-only setting, where we want to bound the space usage on top of storing the strings. Our main contribution is a space-time trade-off for the Internal…

Data Structures and Algorithms · Computer Science 2024-04-29 Gabriel Bathie , Panagiotis Charalampopoulos , Tatiana Starikovskaya