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We present a new class of polynomial-time algorithms for submodular function minimization (SFM), as well as a unified framework to obtain strongly polynomial SFM algorithms. Our algorithms are based on simple iterative methods for the…

Optimization and Control · Mathematics 2020-02-14 Daniel Dadush , László A. Végh , Giacomo Zambelli

Empirical force fields employed in molecular dynamics simulations of complex systems can be optimised to reproduce experimentally determined structural and thermodynamic properties. In contrast, experimental knowledge about the rates of…

Statistical Mechanics · Physics 2022-07-12 P. G. Bolhuis , Z. F. Brotzakis , B. G. Keller

The prediction of chemical properties using Machine Learning (ML) techniques calls for a set of appropriate descriptors that accurately describe atomic and, on a larger scale, molecular environments. A mapping of conformational information…

Chemical Physics · Physics 2021-02-02 Martin P. Bircher , Andreas Singraber , Christoph Dellago

Atomic force microscopy (AFM) has been constantly supporting nanosciences and nanotechnologies for over 30 years, being present in many fields from condensed matter physics to biology. It enables measuring very weak forces at the nanoscale,…

Instrumentation and Detectors · Physics 2021-09-07 L Schwab , P Allain , N Mauran , X Dollat , L Mazenq , D Lagrange , M Gély , S Hentz , G Jourdan , I Favero , B Legrand

To obtain the initial pressure from the collected data on a planar sensor arrangement in Photoacoustic tomography, there exists an exact analytic frequency domain reconstruction formula. An efficient realization of this formula needs to…

Numerical Analysis · Mathematics 2015-01-14 Julian Schmid , Thomas Glatz , Behrooz Zabihian , Mengyang Liu , Wolfgang Drexler , Otmar Scherzer

Atomic force spectroscopy and microscopy (AFM) are invaluable tools to characterize nanostructures and biological systems. Most experiments, including state-of-the-art images of molecular bonds, are achieved by driving probes at their…

Photoacoustic tomography seeks to reconstruct an acoustic initial pressure distribution from the measurement of the ultrasound waveforms. Conventional methods assume a-prior knowledge of the sound speed distribution, which practically is…

Image and Video Processing · Electrical Eng. & Systems 2019-09-16 Hongming Shan , Christopher Wiedeman , Ge Wang , Yang Yang

We present a method for reconstructing two-dimensional velocity fields at specified length scales using observational data from tracer particles in a flow, without the need for interpolation or smoothing. The algorithm, adapted from…

Fluid Dynamics · Physics 2010-04-28 Douglas H. Kelley , Nicholas T. Ouellette

Spectral computed tomography has received considerable interest in recent years since spectral measurements contain much richer information about the object of interest. In spectral computed tomography, we are interested in the energy…

Numerical Analysis · Mathematics 2022-03-04 Katrine O Bangsgaard , Genoveva Burca , Evelina Ametova , Martin S Andersen , Jakob S Jørgensen

We survey the main results of approximation theory for adaptive piecewise polynomial functions. In such methods, the partition on which the piecewise polynomial approximation is defined is not fixed in advance, but adapted to the given…

Numerical Analysis · Mathematics 2015-03-17 Albert Cohen , Jean-Marie Mirebeau

The multichannel trigonometric reconstruction from uniform samples was proposed recently. It not only makes use of multichannel information about the signal but is also capable to generate various kinds of interpolation formulas according…

Classical Analysis and ODEs · Mathematics 2024-12-20 Dong Cheng , Kit Ian Kou

Consider the inverse problem of scattering of time-harmonic acoustic waves by an inhomogeneous medium with complex refractive index. We show that an approximate factorization method can be applied to reconstruct the support of the complex…

Numerical Analysis · Mathematics 2019-03-27 Fenglong Qu , Haiwen Zhang

Image restoration aims to restore high-quality images from degraded counterparts and has seen significant advancements through deep learning techniques. The technique has been widely applied to mobile devices for tasks such as mobile…

Computer Vision and Pattern Recognition · Computer Science 2023-08-25 Xiangyu Chen , Ruiwen Zhen , Shuai Li , Xiaotian Li , Guanghui Wang

We present the Finite Element Method (FEM) for the numerical solution of the multidimensional coefficient inverse problem (MCIP) in two dimensions. This method is used for explicit reconstruction of the coefficient in the hyperbolic…

Numerical Analysis · Mathematics 2016-03-25 L. Beilina

Fluorescence Molecular Tomography (FMT) is a widely used non-invasive optical imaging technology in biomedical research. It usually faces significant accuracy challenges in depth reconstruction, and conventional iterative methods struggle…

Numerical Analysis · Mathematics 2025-10-08 Ruchi Guo , Jiahua Jiang , Bangti Jin , Wuwei Ren , Jianru Zhang

Quaternionic signal processing provides powerful tools for efficiently managing color signals by preserving the intrinsic correlations among signal dimensions through quaternion algebra. In this paper, we address the quaternionic phase…

Computer Vision and Pattern Recognition · Computer Science 2025-05-09 Ren Hu , Pan Lian

Recent developments in deep learning-based methods demonstrated its potential to predict the 3D protein structures using inputs such as protein sequences, Cryo-Electron microscopy (Cryo-EM) images of proteins, etc. However, these methods…

Computer Vision and Pattern Recognition · Computer Science 2022-11-29 Jaydeep Rade , Soumik Sarkar , Anwesha Sarkar , Adarsh Krishnamurthy

When implementing regular enough functions (e.g., elementary or special functions) on a computing system, we frequently use polynomial approximations. In most cases, the polynomial that best approximates (for a given distance and in a given…

Mathematical Software · Computer Science 2007-05-23 Nicolas Brisebarre , Jean-Michel Muller

Image resampling is a necessary component of any operation that changes the size of an image or its geometry. Methods tuned for natural image upsampling (roughly speaking, image enlargement) are analyzed and developed with a focus on their…

Graphics · Computer Science 2015-03-20 Chantal Racette

The three-dimensional reconstruction of vocal folds in medicine usually involves endoscopy and an approach to extract depth information like structured light or stereo matching of images. The resulting mesh can accurately represent the…

Fluid Dynamics · Physics 2023-10-06 Daniel Zieger , Christoph Näger , Stefan Becker , Tobias Günther