Related papers: PyXNAT: XNAT in Python
High-level programming languages such as Python are increasingly used to provide intuitive interfaces to libraries written in lower-level languages and for assembling applications from various components. This migration towards…
Local governments, as part of 'smart city' initiatives and to promote interoperability, are increasingly incorporating open-source software into their data management, analysis, and visualisation workflows. Python, with its concise and…
psifx is a plug-and-play multi-modal feature extraction toolkit, aiming to facilitate and democratize the use of state-of-the-art machine learning techniques for human sciences research. It is motivated by a need (a) to automate and…
The rapid advancement of information technology has introduced a noticeable shift from traditional offline practices to more efficient and interconnected online environments. This transition, while offering convenience, has also increased…
Leveraging medical record information in the era of big data and machine learning comes with the caveat that data must be cleaned and de-identified. Facilitating data sharing and harmonization for multi-center collaborations are…
Despite recent advances in the field of explainability, much remains unknown about the algorithms that neural networks learn to represent. Recent work has attempted to understand trained models by decomposing them into functional circuits…
Motivated by the growing demand for low-precision arithmetic in computational science, we exploit lower-precision emulation in Python -- widely regarded as the dominant programming language for numerical analysis and machine learning.…
As the body of academic literature continues to grow, researchers face increasing difficulties in effectively searching for relevant resources. Existing databases and search engines often fall short of providing a comprehensive and…
Eye-tracking datasets are often shared in the format used by their creators for their original analyses, usually resulting in the exclusion of data considered irrelevant to the primary purpose. In order to increase re-usability of existing…
PaPy, which stands for parallel pipelines in Python, is a highly flexible framework that enables the construction of robust, scalable workflows for either generating or processing voluminous datasets. A workflow is created from user-written…
Large networks are becoming a widely used abstraction for studying complex systems in a broad set of disciplines, ranging from social network analysis to molecular biology and neuroscience. Despite an increasing need to analyze and…
In this paper, we propose the CrossNAS framework, an automated approach for exploring a vast, multidimensional search space that spans various design abstraction layers-circuits, architecture, and systems-to optimize the deployment of…
Computing has revolutionized the biological sciences over the past several decades, such that virtually all contemporary research in the biosciences utilizes computer programs. The computational advances have come on many fronts, spurred by…
Modern atomic physics applications in science and technology pose ever higher demands on the precision of computations of properties of atoms and ions. Especially challenging is the modeling of electronic correlations within the…
Neural Architecture Search (NAS) has shown great potentials in automatically designing scalable network architectures for dense image predictions. However, existing NAS algorithms usually compromise on restricted search space and search on…
Aggregating multi-level feature representation plays a critical role in achieving robust volumetric medical image segmentation, which is important for the auxiliary diagnosis and treatment. Unlike the recent neural architecture search (NAS)…
Managing the data for Information Retrieval (IR) experiments can be challenging. Dataset documentation is scattered across the Internet and once one obtains a copy of the data, there are numerous different data formats to work with. Even…
Exploratory visual data analysis tools empower data analysts to efficiently and intuitively explore data insights throughout the entire analysis cycle. However, the gap between common programmatic analysis (e.g., within computational…
Large language models (LLMs) often struggle to perform multi-target reasoning in long-context scenarios where relevant information is scattered across extensive documents. To address this challenge, we introduce NeuroSymbolic Augmented…
Despite data's crucial role in machine learning, most existing tools and research tend to focus on systems on top of existing data rather than how to interpret and manipulate data. In this paper, we propose DataLab, a unified data-oriented…