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Deep convolutional neural networks (CNNs) trained on objects and scenes have shown intriguing ability to predict some response properties of visual cortical neurons. However, the factors and computations that give rise to such ability, and…

Neurons and Cognition · Quantitative Biology 2018-06-11 Md Nasir Uddin Laskar , Luis G Sanchez Giraldo , Odelia Schwartz

Understanding how receptive fields emerge and organize within brain networks and how neural dynamics couple with stimuli space is fundamental to neuroscience. Models often rely on fine-tuning connectivity to match empirical data, which may…

Neurons and Cognition · Quantitative Biology 2026-01-07 Vasilii Tiselko , Alexander Gorsky , Yuri Dabaghian

Understanding the information processing roles of cortical circuits is an outstanding problem in neuroscience and artificial intelligence. The theoretical setting of Bayesian inference has been suggested as a framework for understanding…

Neurons and Cognition · Quantitative Biology 2018-08-06 Dileep George , Alexander Lavin , J. Swaroop Guntupalli , David Mely , Nick Hay , Miguel Lazaro-Gredilla

We propose a model of the functional architecture of curvature-sensitive cells in the primary visual cortex. The model accounts for the modular and hierarchical organization of the cortex, the horizontal connectivity, and the shape of…

Neurons and Cognition · Quantitative Biology 2026-03-23 Giovanna Citti , Vasiliki Liontou

The design of neural architectures for structured objects is typically guided by experimental insights rather than a formal process. In this work, we appeal to kernels over combinatorial structures, such as sequences and graphs, to derive…

Neural and Evolutionary Computing · Computer Science 2017-10-31 Tao Lei , Wengong Jin , Regina Barzilay , Tommi Jaakkola

Brain stimulation is a powerful tool for understanding cortical function and holds promise for therapeutic interventions in neuropsychiatric disorders. Initial visual prosthetics apply electric microstimulation to early visual cortex which…

Neurons and Cognition · Quantitative Biology 2025-10-07 Johannes Mehrer , Ben Lonnqvist , Anna Mitola , Abdulkadir Gokce , Paolo Papale , Martin Schrimpf

One of the primary objectives of human brain mapping is the division of the cortical surface into functionally distinct regions, i.e. parcellation. While it is generally agreed that at macro-scale different regions of the cortex have…

Neurons and Cognition · Quantitative Biology 2017-03-06 Daniel Moyer , Boris A Gutman , Neda Jahanshad , Paul M. Thompson

Learning on 3D structures of large biomolecules is emerging as a distinct area in machine learning, but there has yet to emerge a unifying network architecture that simultaneously leverages the graph-structured and geometric aspects of the…

Biomolecules · Quantitative Biology 2021-05-18 Bowen Jing , Stephan Eismann , Patricia Suriana , Raphael J. L. Townshend , Ron Dror

The traditional view of neural computation in the cerebral cortex holds that sensory neurons are specialized, i.e., selective for certain dimensions of sensory stimuli. This view was challenged by evidence of contextual interactions between…

Neurons and Cognition · Quantitative Biology 2022-04-26 Sergei Gepshtein , Ambarish Pawar , Sunwoo Kwon , Sergey Savel'ev , Thomas D. Albright

Despite the effectiveness of Convolutional Neural Networks (CNNs) for image classification, our understanding of the relationship between shape of convolution kernels and learned representations is limited. In this work, we explore and…

Computer Vision and Pattern Recognition · Computer Science 2016-11-30 Zhun Sun , Mete Ozay , Takayuki Okatani

Topology can extract the structural information in a dataset efficiently. In this paper, we attempt to incorporate topological information into a multiple output Gaussian process model for transfer learning purposes. To achieve this goal,…

Machine Learning · Computer Science 2023-11-01 Hengrui Luo , Jisu Kim , Alice Patania , Mikael Vejdemo-Johansson

The perceptual experience of architecture is enacted by the sensory and motor system. When we act, we change the perceived environment according to a set of expectations that depend on our body and the built environment. The continuous…

Neurons and Cognition · Quantitative Biology 2020-11-10 Zakaria Djebbara , Thomas Parr , Karl Friston

We present a novel cortically-inspired image completion algorithm. It uses a five dimensional sub-Riemannian cortical geometry modelling the orientation, spatial frequency and phase selective behavior of the cells in the visual cortex. The…

Computer Vision and Pattern Recognition · Computer Science 2022-03-07 Emre Baspinar

This paper introduces a method for learning to generate line drawings from 3D models. Our architecture incorporates a differentiable module operating on geometric features of the 3D model, and an image-based module operating on view-based…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Difan Liu , Mohamed Nabail , Aaron Hertzmann , Evangelos Kalogerakis

We consider large systems of stochastic interacting particles through discontinuous kernels which has vision geometrical constrains. We rigorously derive a Vlasov-Fokker-Planck type of kinetic mean-field equation from the corresponding…

Analysis of PDEs · Mathematics 2017-05-12 Young-Pil Choi , Samir Salem

The characterization of dynamical processes in living systems provides important clues for their mechanistic interpretation and link to biological functions. Thanks to recent advances in microscopy techniques, it is now possible to…

Data Analysis, Statistics and Probability · Physics 2023-11-29 Jesús Pineda , Benjamin Midtvedt , Harshith Bachimanchi , Sergio Noé , Daniel Midtvedt , Giovanni Volpe , Carlo Manzo

Neural surfaces (e.g., neural map encoding, deep implicits and neural radiance fields) have recently gained popularity because of their generic structure (e.g., multi-layer perceptron) and easy integration with modern learning-based setups.…

Graphics · Computer Science 2025-03-18 Romy Williamson , Niloy J. Mitra

This paper introduces the conformal model (an extension of the homogeneous coordinate system) for molecular geometry, where 3D space is represented within R^5 with an inner product different from the usual one. This model enables efficient…

Chemical Physics · Physics 2025-11-12 Jesus Camargo , Carlile Lavor , Michael Souza

Graph Neural Networks (GNN) can capture the geometric properties of neural representations in EEG data. Here we utilise those to study how reinforcement-based motor learning affects neural activity patterns during motor planning, leveraging…

Machine Learning · Computer Science 2024-11-01 Federico Nardi , Jinpei Han , Shlomi Haar , A. Aldo Faisal

The use of cortical field potentials rather than the details of spike trains as the basis for cognitive information processing is proposed. This results in a space of cognitive elements with natural metrics. Sets of spike trains may also be…

Disordered Systems and Neural Networks · Physics 2016-08-31 Henry C. Tuckwell