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We describe a simple algorithm based on a Markov chain process to generate simply connected acyclic directed graphs over a fixed set of vertices. This algorithm is an extension of a previous one, designed to generate acyclic digraphs, non…

Discrete Mathematics · Computer Science 2007-05-23 Guy Melancon , Fabrice Philippe

Real-world networks grow over time; statistical models based on node exchangeability are not appropriate. Instead of constraining the structure of the \textit{distribution} of edges, we propose that the relevant symmetries refer to the…

Social and Information Networks · Computer Science 2025-04-02 Gecia Bravo-Hermsdorff , Lee M. Gunderson , Kayvan Sadeghi

Directed acyclic graphs (DAGs) are used for modeling causal relationships, dependencies, and flows in various systems. However, spectral analysis becomes impractical in this setting because the eigendecomposition of the adjacency matrix…

Information Theory · Computer Science 2024-10-22 Ljubisa Stankovic , Milos Dakovic , Ali Bagheri Bardi , Milos Brajovic , Isidora Stankovic

To measure the tree-likeness of a directed acyclic graph (DAG), a new width parameter that considers the directions of the arcs was recently introduced: scanwidth. We present the first algorithm that efficiently computes the exact scanwidth…

Data Structures and Algorithms · Computer Science 2026-05-21 Niels Holtgrefe , Leo van Iersel , Mark Jones

When designing new molecules with particular properties, it is not only important what to make but crucially how to make it. These instructions form a synthesis directed acyclic graph (DAG), describing how a large vocabulary of simple…

Machine Learning · Computer Science 2020-12-22 John Bradshaw , Brooks Paige , Matt J. Kusner , Marwin H. S. Segler , José Miguel Hernández-Lobato

We extend Andersson-Madigan-Perlman chain graphs by (i) relaxing the semidirected acyclity constraint so that only directed cycles are forbidden, and (ii) allowing up to two edges between any pair of nodes. We introduce global, and ordered…

Machine Learning · Statistics 2016-02-22 Jose M. Peña

This paper explores the role of Directed Acyclic Graphs (DAGs) as a representation of conditional independence relationships. We show that DAGs offer polynomially sound and complete inference mechanisms for inferring conditional…

Artificial Intelligence · Computer Science 2013-04-10 Dan Geiger , Judea Pearl

We introduce a new class of graphical models that generalizes Lauritzen-Wermuth-Frydenberg chain graphs by relaxing the semi-directed acyclity constraint so that only directed cycles are forbidden. Moreover, up to two edges are allowed…

Machine Learning · Statistics 2018-03-02 Jose M. Peña

Estimating a directed acyclic graph (DAG) from observational data represents a canonical learning problem and has generated a lot of interest in recent years. Research has focused mostly on the following two cases: when no information…

Applications · Statistics 2019-02-15 Syed Rahman , Kshitij Khare , George Michailidis , Carlos Martinez , Juan Carulla

We establish a new framework for statistical estimation of directed acyclic graphs (DAGs) when data are generated from a linear, possibly non-Gaussian structural equation model. Our framework consists of two parts: (1) inferring the…

Machine Learning · Statistics 2013-11-15 Po-Ling Loh , Peter Bühlmann

We show that every directed graph $G$ with $n$ vertices and $m$ edges admits a directed acyclic graph (DAG) with $m^{1+o(1)}$ edges, called a DAG projection, that can either $(1+1/\text{polylog} (n))$-approximate distances between all pairs…

Data Structures and Algorithms · Computer Science 2026-04-07 Bernhard Haeupler , Yonggang Jiang , Thatchaphol Saranurak

The diameter of an undirected unweighted graph $G=(V,E)$ is the maximum value of the distance from any vertex $u$ to another vertex $v$ for $u,v \in V$ where distance i.e. $d(u,v)$ is the length of the shortest path from $u$ to $v$ in $G$.…

Data Structures and Algorithms · Computer Science 2017-11-13 Bhadrachalam Chitturi , Priyanshu Das

Directed acyclic graphs (DAGs) are central to science and engineering applications including causal inference, scheduling, and neural architecture search. In this work, we introduce the DAG Convolutional Network (DCN), a novel graph neural…

Signal Processing · Electrical Eng. & Systems 2026-05-20 Samuel Rey , Hamed Ajorlou , Gonzalo Mateos

Maximal ancestral graphs (MAGs) are used to encode conditional independence relations in DAG models with hidden variables. Different MAGs may represent the same set of conditional independences and are called Markov equivalent. This paper…

Methodology · Statistics 2012-07-09 Jin Tian

One of the hallmark achievements of the theory of graphical models and Bayesian model selection is the celebrated greedy equivalence search (GES) algorithm due to Chickering and Meek. GES is known to consistently estimate the structure of…

Machine Learning · Statistics 2024-06-26 Bryon Aragam

Background: Diagnostic test accuracy (DTA) studies, like etiological studies, are susceptible to various biases including reference standard error bias, partial verification bias, spectrum effect, confounding, and bias from misassumption of…

Methodology · Statistics 2026-01-21 Yang Lu , Nandini Dendukuri

We consider the PC-algorithm Spirtes et. al. (2000) for estimating the skeleton of a very high-dimensional acyclic directed graph (DAG) with corresponding Gaussian distribution. The PC-algorithm is computationally feasible for sparse…

Statistics Theory · Mathematics 2007-06-13 Markus Kalisch , Peter Buehlmann

Acyclic and cyclic orientations of an undirected graph have been widely studied for their importance: an orientation is acyclic if it assigns a direction to each edge so as to obtain a directed acyclic graph (DAG) with the same vertex set;…

Data Structures and Algorithms · Computer Science 2015-06-22 Alessio Conte , Roberto Grossi , Andrea Marino , Romeo Rizzi

A common theme in causal inference is learning causal relationships between observed variables, also known as causal discovery. This is usually a daunting task, given the large number of candidate causal graphs and the combinatorial nature…

Machine Learning · Statistics 2022-10-11 Romain Lopez , Jan-Christian Hütter , Jonathan K. Pritchard , Aviv Regev

We develop a novel convolutional architecture tailored for learning from data defined over directed acyclic graphs (DAGs). DAGs can be used to model causal relationships among variables, but their nilpotent adjacency matrices pose unique…

Machine Learning · Computer Science 2024-05-07 Samuel Rey , Hamed Ajorlou , Gonzalo Mateos