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Although predicted theoretically excitonic phase transitions have never been observed. Recently it has been claimed that they can occur in some strongly correlated materials. We study the possibility of an excitonic transition in a two-band…

Condensed Matter · Physics 2009-10-28 M. A. Continentino , G. M. Japiassu , A. Troper

We study a simple solvable model describing the genesis of monomer sequences for hetero-polymers (such as proteins), as the result of the equilibration of a slow stochastic genetic selection process which is assumed to be driven by the…

Disordered Systems and Neural Networks · Physics 2007-05-23 H. Chakravorty , A. C. C. Coolen , D. Sherrington

The evidence that Flowering Locus T (FT) protein and its paralog Twin Sister of FT, act as the long distance floral stimulus, or at least that they are part of it in diverse plant species, has attracted much attention in recent years.…

Biomolecules · Quantitative Biology 2012-10-25 I. G. Matsoukas , A. J. Massiah , B. Thomas

We consider a fully quadratic vibronic model Hamiltonian for studying photoinduced electronic transitions through conical intersections. Using a second order perturbative approximation for diabatic couplings we derive an analytical…

Chemical Physics · Physics 2015-01-12 Julia S. Endicott , Loic Joubert-Doriol , Artur F. Izmaylov

We show that electron hopping in a lattice of molecules possessing a Berry phase naturally leads to pairing. Our building block is a simple molecular site model inspired by C$_{60}$, but realized in closer similarity with Na$_3$. In the…

Condensed Matter · Physics 2009-10-22 N. Manini , E. Tosatti , S. Doniach

Phase transitions between crystalline solids occur either through the nucleation and growth mechanism, a process that is slow and destructive or through the diffusion-less and order preserving Martensitic route. In both organic and…

In simulations of sexual reproduction with diploid individuals, we introduce that female haploid gametes recognize one specific allele of the genomes as a marker of the male haploid gametes. They fuse to zygotes preferrably with male…

Populations and Evolution · Quantitative Biology 2009-11-13 S. Cebrat , D. Stauffer

This paper considers a framework for combinatorial variants of perpetual-scheduling problems. Given an independence system $(E,\mathcal{I})$, a schedule consists of an independent set $I_t \in \mathcal{I}$ for every time step $t \in…

Data Structures and Algorithms · Computer Science 2026-03-27 Mirabel Mendoza-Cadena , Arturo Merino , Mads Anker Nielsen , Kevin Schewior

In population genetics, mutation rate is often treated as a homogeneous parameter across the genome. Empirical evidence, however, shows systematic variation across genomic contexts associated with chromatin organization and epigenomic…

Populations and Evolution · Quantitative Biology 2026-03-05 Elisa Heinrich-Mora , Marcus W. Feldman

A mixture of light and heavy spin-polarized fermionic atoms in an optical lattice is considered. Tunneling of the heavy atoms is neglected such that they are only subject to thermal fluctuations. This results in a complex interplay between…

Disordered Systems and Neural Networks · Physics 2009-11-11 K. Ziegler

This article presents a new set representation named the hybrid zonotope that is equivalent to the union of $2^N$ constrained zonotopes -- convex polytopes -- through the addition of $N$ binary zonotope factors. The major contribution of…

Systems and Control · Electrical Eng. & Systems 2023-04-26 Trevor J. Bird , Herschel C. Pangborn , Neera Jain , Justin P. Koeln

Phase transitions (PTs) are generally classified into second-order and first-order transitions, each exhibiting different intrinsic properties. For instance, a first-order transition exhibits latent heat and hysteresis when a control…

Statistical Mechanics · Physics 2020-09-04 Jinha Park , Sudo Yi , B. Kahng

Interfacial segregation can stabilize grain structures and even lead to grain boundary complexion transitions. However, understanding of the complexity of such phenomena in polycrystalline materials is limited, as most studies focus on…

Materials Science · Physics 2021-07-02 P Garg , Z Pan , V Turlo , TJ Rupert

Motivated by recent photoemission and pump-probe experiments, we report determinant Quantum Monte Carlo simulations of hybridization fluctuations in the half-filled periodic Anderson model. A tentative phase diagram is constructed based…

Strongly Correlated Electrons · Physics 2019-11-27 Danqing Hu , Jian-Jun Dong , Yi-feng Yang

We discuss two different ways of chromosomes' and genomes' evolution. Purifying selection dominates in large panmictic populations, where Mendelian law of independent gene assortment is valid. If the populations are small, recombination…

Populations and Evolution · Quantitative Biology 2010-07-21 Stanislaw Cebrat , Dietrich Stauffer , Wojciech Waga

We extend to the highly degenerate case a recent approach for analyzing the sources of CP violation in baryogenesis models with quasi-degenerate neutrinos. In this approach an expansion of the resummed propagator around the poles is plugged…

High Energy Physics - Phenomenology · Physics 2021-11-24 J. Racker

We investigate the final stage of cytokinesis in two types of amoeba, pointing out the existence of biphasic furrow contraction. The first phase is characterized by a constant contraction rate, is better studied, and seems universal to a…

Cell Behavior · Quantitative Biology 2007-05-23 D. Biron , P. Libros , D. Sagi , D. Mirelman , E. Moses

During batch growth on mixtures of two growth-limiting substrates, microbes consume the substrates either sequentially or simultaneously. These growth patterns are manifested in all types of bacteria and yeasts. The ubiquity of these growth…

Cell Behavior · Quantitative Biology 2008-01-09 Jason T. Noel , Atul Narang

Transport across heterogeneous, patchy environments is a ubiquitous phenomenon spanning fields of study including ecological movement, intracellular transport and regions of specialised function in a cell. These regions or patches may be…

Statistical Mechanics · Physics 2017-10-06 Sergei Fedotov , Helena Stage

A plausible consequence of rugged energy landscapes of biomolecules is that functionally competent folded states may not be unique, as is generally assumed. Indeed, molecule-to-molecule variations in the dynamics of enzymes and ribozymes…

Soft Condensed Matter · Physics 2012-11-06 Changbong Hyeon , Jinwoo Lee , Jeseong Yoon , Sungchul Hohng , D. Thirumalai