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Causal inference is a science with multi-disciplinary evolution and applications. On the one hand, it measures effects of treatments in observational data based on experimental designs and rigorous statistical inference to draw causal…

Methodology · Statistics 2022-09-05 Jingying Zeng , Run Wang

Protein subcellular localization is an important factor in normal cellular processes and disease. While many protein localization resources treat it as static, protein localization is dynamic and heavily influenced by biological context.…

Molecular Networks · Quantitative Biology 2022-12-13 Chris S. Magnano , Anthony Gitter

There is a brief description of the probabilistic causal graph model for representing, reasoning with, and learning causal structure using Bayesian networks. It is then argued that this model is closely related to how humans reason with and…

Artificial Intelligence · Computer Science 2013-02-08 Scott B. Morris , Doug Cork , Richard E. Neapolitan

We study the scenario of graph-based clustering algorithms such as spectral clustering. Given a set of data points, one first has to construct a graph on the data points and then apply a graph clustering algorithm to find a suitable…

Machine Learning · Statistics 2011-02-11 Markus Maier , Ulrike von Luxburg , Matthias Hein

Causal effect estimation from data typically requires assumptions about the cause-effect relations either explicitly in the form of a causal graph structure within the Pearlian framework, or implicitly in terms of (conditional) independence…

Machine Learning · Computer Science 2023-06-21 Abhin Shah , Karthikeyan Shanmugam , Murat Kocaoglu

Objective: To identify and classify the positive and negative impacts of using Use Cases in real-world settings. Method: We conducted a systematic mapping study. The search strategies retrieved a set of 4,431 papers out of which 47 were…

Software Engineering · Computer Science 2019-06-18 José L. Barros-Justo , Fabiane B. V. Benitti , Saurabh Tiwari

The MAP model was introduced in information system engineering in order to model processes on a flexible way. The intentional level of this model helps an engineer to execute a process with a strong relationship to the situation of the…

Software Engineering · Computer Science 2009-11-04 Rebecca Deneckere , Elena Kornyshova , Colette Rolland

We present a framework for representing and modeling data on graphs. Based on this framework, we study three typical classes of graph signals: smooth graph signals, piecewise-constant graph signals, and piecewise-smooth graph signals. For…

Artificial Intelligence · Computer Science 2015-12-18 Siheng Chen , Rohan Varma , Aarti Singh , Jelena Kovačević

The shift from Cloud Computing to a Cloud-Edge continuum presents new opportunities and challenges for data-intensive and interactive applications. Edge computing has garnered a lot of attention from both industry and academia in recent…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-02 Antonios Makris , Theodoros Theodoropoulos , Evangelos Psomakelis , Emanuele Carlini , Matteo Mordacchini , Patrizio Dazzi , Konstantinos Tserpes

Causal inference is the process of capturing cause-effect relationship among variables. Most existing works focus on dealing with structured data, while mining causal relationship among factors from unstructured data, like text, has been…

Computation and Language · Computer Science 2021-04-22 Xiao Liu , Da Yin , Yansong Feng , Yuting Wu , Dongyan Zhao

We study a two-stage model, in which students are 1) admitted to college on the basis of an entrance exam which is a noisy signal about their qualifications (type), and then 2) those students who were admitted to college can be hired by an…

Computer Science and Game Theory · Computer Science 2018-08-29 Sampath Kannan , Aaron Roth , Juba Ziani

Task graphs provide a simple way to describe scientific workflows (sets of tasks with dependencies) that can be executed on both HPC clusters and in the cloud. An important aspect of executing such graphs is the used scheduling algorithm.…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-18 Jakub Beránek , Stanislav Böhm , Vojtěch Cima

We have created a knowledge graph based on major data sources used in ecotoxicological risk assessment. We have applied this knowledge graph to an important task in risk assessment, namely chemical effect prediction. We have evaluated nine…

Artificial Intelligence · Computer Science 2022-03-31 Erik B. Myklebust , Ernesto Jiménez-Ruiz , Jiaoyan Chen , Raoul Wolf , Knut Erik Tollefsen

Vertex colouring is a well-known problem in combinatorial optimisation, whose alternative integer programming formulations have recently attracted considerable attention. This paper briefly surveys seven known formulations of vertex…

Discrete Mathematics · Computer Science 2014-04-10 Edmund K. Burke , Jakub Marecek , Andrew J. Parkes , Hana Rudova

One of the challenges of task planning is to find out what causes the planning failure and how to handle the failure intelligently. This paper shows how to achieve this. The idea is inspired by the connected graph: each verticle represents…

Robotics · Computer Science 2022-01-11 Guowei Cui , Xiaoping Chen

Computers and algorithms play an ever-increasing role in obtaining new results in graph theory. In this survey, we present a broad range of techniques used in computer-assisted graph theory, including the exhaustive generation of all…

Combinatorics · Mathematics 2025-08-29 Jorik Jooken

Algorithms for constraint-based causal discovery select graphical causal models among a space of possible candidates (e.g., all directed acyclic graphs) by executing a sequence of conditional independence tests. These may be used to inform…

Methodology · Statistics 2025-09-19 Ting-Hsuan Chang , Zijian Guo , Daniel Malinsky

Causal inference aids researchers in discovering cause-and-effect relationships, leading to scientific insights. Accurate causal estimation requires identifying confounding variables to avoid false discoveries. Pearl's causal model uses…

Machine Learning · Computer Science 2025-04-22 Anna Zeng , Michael Cafarella , Batya Kenig , Markos Markakis , Brit Youngmann , Babak Salimi

In machine learning, exploring data correlations to predict outcomes is a fundamental task. Recognizing causal relationships embedded within data is pivotal for a comprehensive understanding of system dynamics, the significance of which is…

Machine Learning · Computer Science 2023-11-28 Simi Job , Xiaohui Tao , Taotao Cai , Haoran Xie , Lin Li , Jianming Yong , Qing Li

Graph isomorphism is an important computer science problem. The problem for the general case is unknown to be in polynomial time. The base algorithm for the general case works in quasi-polynomial time. The solutions in polynomial time for…

Discrete Mathematics · Computer Science 2017-11-23 Vaibhav Amit Patel