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The evolutionary balance between innate and learned behaviors is highly intricate, and different organisms have found different solutions to this problem. We hypothesize that the emergence and exact form of learning behaviors is naturally…

Neurons and Cognition · Quantitative Biology 2023-03-14 Emmanouil Giannakakis , Sina Khajehabdollahi , Anna Levina

We study discrete dynamical systems through the topological concepts of limit set, which consists of all points that can be reached arbitrarily late, and asymptotic set, which consists of all adhering values of orbits. In particular, we…

Dynamical Systems · Mathematics 2011-10-20 Guillon Pierre , Richard Gaétan

Biomaterial systems have allowed for the in vitro production of complex, emergent tissue behaviors that were not possible with conventional 2D culture systems allowing for analysis of the normal development as well as disease processes. We…

Tissues and Organs · Quantitative Biology 2019-10-16 Matthew S Hall , Joseph T Decker , Lonnie D Shea

Elementary cellular automata (ECA) present iconic examples of complex systems. Though described only by one-dimensional strings of binary cells evolving according to nearest-neighbour update rules, certain ECA rules manifest complex…

Quantum Physics · Physics 2024-03-21 Matthew Ho , Andri Pradana , Thomas J. Elliott , Lock Yue Chew , Mile Gu

We address the problem of parameter estimation in models of systems biology from noisy observations. The models we consider are characterized by simultaneous deterministic nonlinear differential equations whose parameters are either taken…

Machine Learning · Statistics 2017-05-01 Xin Liu , Mahesan Niranjan

This paper describes the method of visualization of periodic constituents and instability areas in series of measurements, being based on the algorithm of smoothing out and concept of one-dimensional cellular automata. A method can be used…

Machine Learning · Computer Science 2012-05-28 D. V. Lande

Understanding the behaviour of biological systems requires a complex setting of in vitro and in vivo experiments, which attracts high costs in terms of time and resources. The use of mathematical models allows researchers to perform…

Computational Engineering, Finance, and Science · Computer Science 2009-11-30 Thomas Anung Basuki , Antonio Cerone , Rafael V. Carvalho

We introduce the entropy rate of multidimensional cellular automata. This number is invariant under shift-commuting isomorphisms; as opposed to the entropy of such CA, it is always finite. The invariance property and the finiteness of the…

Dynamical Systems · Mathematics 2012-06-29 François Blanchard , Pierre Tisseur

Layered Cellular Automata (LCA) extends the concept of traditional cellular automata (CA) to model complex systems and phenomena. In LCA, each cell's next state is determined by the interaction of two layers of computation, allowing for…

Cellular Automata and Lattice Gases · Physics 2023-08-15 Abhishek Dalai

We construct a two dimensional Cellular Automata based model for the description of pedestrian dynamics. Wide range of complicated pattern formation phenomena in pedestrian dynamics are described in the model, e.g. lane formation, jams in a…

Cellular Automata and Lattice Gases · Physics 2012-11-29 Quntao Zhuang

This paper presents a novel approach to the description and understanding of two-dimensional binary cellular automata with the Moore neighborhood that preserve the number of active cells. Such dynamical systems are known to successfully…

Dynamical Systems · Mathematics 2025-12-10 B. Wolnik , D. M. Falkiewicz , W. Bołt , A. Rutkowski , B. De Baets

Access control is fundamental to computer security, and has thus been the subject of extensive formal study. In particular, *relative expressiveness analysis* techniques have used formal mappings called *simulations* to explore whether one…

Cryptography and Security · Computer Science 2015-05-05 William C. Garrison , Adam J. Lee

Cellular signaling is essential in information processing and decision making. Therefore, a variety of experimental approaches have been developed to study signaling on bulk and single-cell level. Single-cell measurements of signaling…

Quantitative Methods · Quantitative Biology 2019-04-18 Carolin Loos , Jan Hasenauer

Concomitant with the evolution of biological diversity must have been the evolution of mechanisms that facilitate evolution, due to the essentially infinite complexity of protein sequence space. We describe how evolvability can be an object…

Populations and Evolution · Quantitative Biology 2009-11-10 David J. Earl , Michael W. Deem

Among the fundamental questions in computer science is that of the impact of synchronism/asynchronism on computations, which has been addressed in various fields of the discipline: in programming, in networking, in concurrence theory, in…

Cellular Automata and Lattice Gases · Physics 2024-03-13 Isabel Donoso Leiva , Eric Goles , Martín Ríos-Wilson , Sylvain Sené

The ability of an intelligent environment to connect and adapt to real internal sates, needs and behaviors' meaning of humans can be made possible by considering users' emotional states as contextual parameters. In this paper, we build on…

Human-Computer Interaction · Computer Science 2009-12-10 Nevin Vunka Jungum , Eric Laurent

Defining the density flow of perturbations moving at a given speed for cellular automata, we establish equalities and inequalities between the measurable entropy of a cellular automaton and the measurable entropy of its associated shift.

Dynamical Systems · Mathematics 2012-07-12 Pierre Tisseur

We map cell-state transition rules of elementary cellular automata (ECA) onto the cognitive control versus schizotypy spectrum phase space and interpret cellular automaton behaviour in terms of creativity. To implement the mapping we draw…

Cellular Automata and Lattice Gases · Physics 2013-05-14 Andrew Adamatzky , Andrew Wuensche

Modeling biological processes is a highly demanding task because not all processes are fully understood. Mathematical models allow us to test hypotheses about possible mechanisms of biological processes. The mathematical mechanisms…

Numerical Analysis · Mathematics 2023-12-11 Cordula Reisch , Hannah Burmester

A transition from asymmetric to symmetric patterns in time-dependent extended systems is described. It is found that one dimensional cellular automata, started from fully random initial conditions, can be forced to evolve into complex…

Cellular Automata and Lattice Gases · Physics 2007-05-23 J. R. Sanchez , R. Lopez-Ruiz