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Related papers: On diffusive stability of Eigen's quasispecies mod…

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Recombination is introduced into Eigen's theory of quasispecies evolution. Comparing numerical simulations of the rate equations in the non-recombining and recombining cases show that recombination has a strong effect on the error threshold…

Populations and Evolution · Quantitative Biology 2007-05-23 Martin Nilsson Jacobi , Mats Nordahl

A diffusive Lotka-Volterra competition model is considered for the combined effect of spatial dispersal and spatial variations of resource on the population persistence and exclusion. First it is shown that in a two-species system in which…

Analysis of PDEs · Mathematics 2020-07-21 Wenjie Ni , Junping Shi , Mingxin Wang

Analytical analysis of spatially extended autocatalytic and hypercyclic systems is presented. It is shown that spatially explicit systems in the form of reaction-diffusion equations with global regulation possess the same major qualitative…

Populations and Evolution · Quantitative Biology 2009-01-26 Alexander S. Bratus' , Vladimir P. Posvyanskii , Artem S. Novozhilov

In this paper, we study the equilibrium behavior of Eigen's quasispecies equations for an arbitrary gene network. We consider a genome consisting of $ N $ genes, so that each gene sequence $ \sigma $ may be written as $ \sigma = \sigma_1…

Genomics · Quantitative Biology 2009-11-10 Emmanuel Tannenbaum , Eugene I. Shakhnovich

A replicator equation with explicit space and global regulation is considered. This model provides a natural framework to follow frequencies of species that are distributed in the space. For this model, analogues to classical notions of the…

Populations and Evolution · Quantitative Biology 2011-01-04 Alexander S. Bratus' , Vladimir P. Posvyanskii , Artem S. Novozhilov

We suggest a natural approach that leads to a modification of classical quasispecies models and incorporates the possibility of population extinction in addition to growth. The resulting modified models are called open. Their essential…

Populations and Evolution · Quantitative Biology 2019-03-25 Ivan Yegorov , Artem S. Novozhilov , Alexander S. Bratus

In this paper we characterise the global stability, global boundedness and recurrence of solutions of a scalar nonlinear stochastic differential equation. The differential equation is a perturbed version of a globally stable autonomous…

Probability · Mathematics 2013-10-10 John A. D. Appleby , Jian Cheng , Alexandra Rodkina

We study Eigen's quasispecies model in the asymptotic regime where the length of the genotypes goes to infinity and the mutation probability goes to 0. A limiting infinite system of differential equations is obtained. We prove the…

Populations and Evolution · Quantitative Biology 2017-04-25 Joseba Dalmau

We study nonlinear stability of spatially homogeneous oscillations in reaction-diffusion systems. Assuming absence of unstable linear modes and linear diffusive behavior for the neutral phase, we prove that spatially localized perturbations…

Analysis of PDEs · Mathematics 2008-07-01 Thierry Gallay , Arnd Scheel

This paper is concerned with quasilinear parabolic reaction-diffusion-advection systems on extended domains. Frameworks for well-posedness in Hilbert spaces and spaces of continuous functions are presented, based on known results using…

Dynamical Systems · Mathematics 2013-05-17 Martin Meyries , Jens D. M. Rademacher , Eric Siero

We study Eigen's quasispecies model in the asymptotic regime where the length of the genotypes goes to infinity and the mutation probability goes to 0. We give several explicit formulas for the stationary solutions of the limiting system of…

Populations and Evolution · Quantitative Biology 2016-04-27 Raphaël Cerf , Joseba Dalmau

We consider self-similar approximations of nonlinear hyperbolic systems in one space dimension with Riemann initial data and general diffusion matrix. We assume that the matrix of the system is strictly hyperbolic and the diffusion matrix…

Analysis of PDEs · Mathematics 2008-12-16 K. T. Joseph , Philippe G. LeFloch

A general reaction-diffusion equation with spatiotemporal delay and homogeneous Dirichlet boundary condition is considered. The existence and stability of positive steady state solutions are proved via studying an equivalent…

Analysis of PDEs · Mathematics 2021-02-24 Wenjie Zuo , Junping Shi

The real Ginzburg-Landau equation possesses a family of spatially periodic equilibria. If the wave number of an equilibrium is strictly below the so called Eckhaus boundary the equilibrium is known to be spectrally and diffusively stable,…

Analysis of PDEs · Mathematics 2019-01-21 Julien Guillod , Guido Schneider , Peter Wittwer , Dominik Zimmermann

We present a novel study on enhancing the capability of preserving the content in world models, focusing on a property we term World Stability. Recent diffusion-based generative models have advanced the synthesis of immersive and realistic…

Machine Learning · Computer Science 2025-03-12 Soonwoo Kwon , Jin-Young Kim , Hyojun Go , Kyungjune Baek

We study the transport property of diffusion in a finite translationally invariant quantum subsystem described by a tight-binding Hamiltonian with a single energy band and interacting with its environment by a coupling in terms of…

Statistical Mechanics · Physics 2010-03-01 Massimiliano Esposito , Pierre Gaspard

Biological evolution in a sequence space with random fitnesses is studied within Eigen's quasispecies model. A strong selection limit is employed, in which the population resides at a single sequence at all times. Evolutionary trajectories…

Statistical Mechanics · Physics 2009-11-07 Joachim Krug , Christian Karl

For a Nicholson's blowflies system with patch structure and multiple discrete delays, we analyze several features of the global asymptotic behavior of its solutions. It is shown that if the spectral bound of the community matrix is…

Dynamical Systems · Mathematics 2015-06-16 Teresa Faria , Gergely Rost

We study a diffusion model of phase field type, consisting of a system of two partial differential equations encoding the balances of microforces and microenergy; the two unknowns are the order parameter and the chemical potential. By a…

Analysis of PDEs · Mathematics 2011-03-24 Pierluigi Colli , Gianni Gilardi , Paolo Podio-Guidugli , Juergen Sprekels

A reaction--diffusion replicator equation is studied. A novel method to apply the principle of global regulation is used to write down the model with explicit spatial structure. Properties of stationary solutions together with their…

Populations and Evolution · Quantitative Biology 2013-08-28 Artem S. Novozhilov , Vladimir P. Posvyanskii , Alexander S. Bratus
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