English
Related papers

Related papers: Modelling cytoskeletal traffic: an interplay betwe…

200 papers

We present a study of exclusion processes on networks as models for complex transport phenomena and in particular for active transport of motor proteins along the cytoskeleton. We argue that active transport processes on networks…

Statistical Mechanics · Physics 2013-08-12 I. Neri , N. Kern , A. Parmeggiani

We study asymmetric exclusion processes (TASEP) on a nonuniform one-dimensional ring consisting of two segments having unequal hopping rates, or {\em defects}. We allow weak particle nonconservation via Langmuir kinetics (LK), that are…

Statistical Mechanics · Physics 2017-01-12 Bijoy Daga , Souvik Mondal , Anjan Kumar Chandra , Tirthankar Banerjee , Abhik Basu

We construct a one-dimensional totally asymmetric simple exclusion process (TASEP) on a ring with two segments having unequal hopping rates, coupled to particle non-conserving Langmuir kinetics (LK) characterized by equal attachment and…

Statistical Mechanics · Physics 2015-08-19 Tirthankar Banerjee , Anjan Kumar Chandra , Abhik Basu

Motor proteins are key players in intracellular transport processes and biological motion. Theoretical modeling of these systems has been achieved by the use of step processes on one-dimensional lattices. After a comprehensive introduction…

Statistical Mechanics · Physics 2007-05-23 Hauke Hinsch , Roger Kouyos , Erwin Frey

Asymmetric exclusion process (TASEP) along a one-dimensional (1D) open channel sets the paradigm for 1D driven models and nonequilibrium phase transitions in open 1D models. Inspired by the phenomenologies of an open TASEP with Langmuir…

Statistical Mechanics · Physics 2026-02-10 Sourav Pal , Abhik Basu

We propose and study a one-dimensional (1D) model consisting of two lanes with open boundaries. One of the lanes executes diffusive and the other lane driven unidirectional or asymmetric exclusion dynamics, which are mutually coupled…

Statistical Mechanics · Physics 2023-11-27 Atri Goswami , Utsa Dey , Sudip Mukherjee

The asymmetric simple exclusion process with additional Langmuir kinetics, i.e. attachment and detachment in the bulk, is a paradigmatic model for intracellular transport. Here we study this model in the presence of randomly distributed…

Statistical Mechanics · Physics 2009-11-13 Philip Greulich , Andreas Schadschneider

We study a minimal lattice model which describes bidirectional transport of "particles" driven along a one dimensional track, as is observed in microtubule based, motor protein driven bidirectional transport of cargo vesicles, lipid bodies…

Statistical Mechanics · Physics 2011-09-29 Sudipto Muhuri , Lenin Shagolsem , Madan Rao

Motivated by the recent experimental observations on clustering of motor proteins on microtubule filament, we study an open system of two parallel totally asymmetric simple exclusion processes under asymmetric coupling conditions, which…

Statistical Mechanics · Physics 2016-03-23 Arvind Kumar Gupta

We investigate the simple one-dimensional driven model, the totally asymmetric exclusion process, coupled to mutually interactive Langmuir kinetics. This model is motivated by recent studies on clustering of motor proteins on microtubules.…

Biological Physics · Physics 2015-06-23 H. D. Vuijk , R. Rens , M. Vahabi , F. C. MacKintosh , A. Sharma

Theoretical advances in the study of non-equilibrium phenomena are briefly reviewed with emphasis on steady state properties of one-dimensional driven lattice gases. The presentation is focused on the totally asymmetric simple-exclusion…

Statistical Mechanics · Physics 2008-03-19 J. G. Brankov , N. C. Pesheva , N. Zh. Bunzarova

Several theoretical models based on totally asymmetric simple exclusion process (TASEP) have been extensively utilized to study various non-equilibrium transport phenomena. Inspired by the the role of microtubule-transported vesicles in…

Statistical Mechanics · Physics 2021-02-03 Akriti Jindal , Atul Kumar Verma , Arvind Kumar Gupta

Multi-lane totally asymmetric simple exclusion processes with interactions between the lanes have recently been investigated actively. This paper proposes a two-lane model with extended Langmuir kinetics on a periodic lattice. Both…

Cellular Automata and Lattice Gases · Physics 2022-02-09 Hiroki Yamamoto , Shingo Ichiki , Daichi Yanagisawa , Katsuhiro Nishinari

The totally asymmetric simple exclusion process (TASEP) is a paradigmatic stochastic model for non-equilibrium physics, and has been successfully applied to describe active transport of molecular motors along cytoskeletal filaments.…

Biological Physics · Physics 2018-07-25 Mareike Bojer , Isabella R. Graf , Erwin Frey

We explore how the interplay of finite availability, carrying capacity of particles at different parts of a spatially extended system and particle diffusion between them control the steady state currents and density profiles in a…

Statistical Mechanics · Physics 2024-12-04 Sourav Pal , Parna Roy , Abhik Basu

The asymmetric simple exclusion process (ASEP) is a fundamental stochastic model describing asymmetric many-particle diffusion with hard-core interactions on a one-dimensional lattice, and has been widely applied in the study of…

Statistical Mechanics · Physics 2026-03-11 Yuki Ishiguro , Yasunobu Ando

Nonequilibrium collective motion is ubiquitous in nature and often results in a rich collection of intringuing phenomena, such as the formation of shocks or patterns, subdiffusive kinetics, traffic jams, and nonequilibrium phase…

Statistical Mechanics · Physics 2011-12-20 Mauro Mobilia , Tobias Reichenbach , Hauke Hinsch , Thomas Franosch , Erwin Frey

We develop a mean-field theory for the totally asymmetric simple exclusion process (TASEP) with open boundaries, in order to investigate the so-called dynamical transition. The latter phenomenon appears as a singularity in the relaxation…

Statistical Mechanics · Physics 2020-08-11 Davide Botto , Alessandro Pelizzola , Marco Pretti , Marco Zamparo

We study the totally asymmetric simple exclusion process (TASEP) on complex networks, as a paradigmatic model for transport subject to excluded volume interactions. Building on TASEP phenomenology on a single segment and borrowing ideas…

Statistical Mechanics · Physics 2011-08-09 I. Neri , N. Kern , A. Parmeggiani

We investigate a balance network of the asymmetric simple exclusion process (ASEP). Subsystems consisting of ASEPs are connected by bidirectional links with each other, which results in balance between every pair of subsystems. The network…

Statistical Mechanics · Physics 2013-02-18 Takahiro Ezaki , Katsuhiro Nishinari
‹ Prev 1 2 3 10 Next ›