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Pattern avoidance classes of permutations that cannot be expressed as unions of proper subclasses can be described as the set of subpermutations of a single bijection. In the case that this bijection is a permutation of the natural numbers…

We consider the well-studied pattern counting problem: given a permutation $\pi \in \mathbb{S}_n$ and an integer $k > 1$, count the number of order-isomorphic occurrences of every pattern $\tau \in \mathbb{S}_k$ in $\pi$. Our first result…

Biclustering is a powerful approach to search for patterns in data, as it can be driven by a function that measures the quality of diverse types of patterns of interest. However, due to its computational complexity, the exploration of the…

We collect open problems in permutation patterns on four themes: rank-unimodality in the permutation pattern poset, Wilf-equivalence and shape-Wilf-equivalence, the enumeration of derangements in permutation classes, and sorting by stacks…

We consider learning a causal ordering of variables in a linear non-Gaussian acyclic model called LiNGAM. Several existing methods have been shown to consistently estimate a causal ordering assuming that all the model assumptions are…

Probabilistic algorithms are applied to prove theorems about the finite general linear and unitary groups which are typically proved by techniques such as character theory and Moebius inversion. Among the theorems studied are Steinberg's…

We consider the question of computing the distribution of a permutation statistics over restricted permutations via enumeration schemes. The restricted permutations are those avoiding sets of vincular patterns (which include both classical…

We consider the problem of explaining the predictions of an arbitrary blackbox model $f$: given query access to $f$ and an instance $x$, output a small set of $x$'s features that in conjunction essentially determines $f(x)$. We design an…

In the 60's, Knuth introduced stack-sorting and serial compositions of stacks. In particular, one significant question arise out of the work of Knuth: how to decide efficiently if a given permutation is sortable with 2 stacks in series?…

Sorting is one of the most used and well investigated algorithmic problem [1]. Traditional postulation supposes the sorting data archived, and the elementary operation as comparisons of two numbers. In a view of appearance of new processors…

In this paper we introduce and study a class of tableaux which we call permutation tableaux; these tableaux are naturally in bijection with permutations, and they are a distinguished subset of the Le-diagrams of Alex Postnikov. The…

This dissertation presents a multifaceted look into the structural decomposition of permutation classes. The theory of permutation patterns is a rich and varied field, and is a prime example of how an accessible and intuitive definition…

Biclustering is a class of techniques that simultaneously clusters the rows and columns of a matrix to sort heterogeneous data into homogeneous blocks. Although many algorithms have been proposed to find biclusters, existing methods suffer…

Various specifiable combinatorial structures, with d extensive parameters, can be exactly sampled both by the recursive method, with linear arithmetic complexity if a heavy preprocessing is performed, or by the Boltzmann method, with…

Grouping elements into families to analyse them separately is a standard analysis procedure in many areas of sciences. We propose herein a new algorithm based on the simple idea that members from a family look like each other, and don't…

We apply ideas from the cluster method to q-count the permutations of a multiset according to the number of occurrences of certain generalized patterns, as defined by Babson and Steingrimsson. In particular, we consider those patterns with…

Many applications, including rank aggregation, crowd-labeling, and graphon estimation, can be modeled in terms of a bivariate isotonic matrix with unknown permutations acting on its rows and/or columns. We consider the problem of estimating…

Inference of the marginal likelihood of sample allele configurations using backward algorithms yields identical results with the Kingman coalescent, the Moran model, and the diffusion model (up to a scaling of time). For inference of…

Simulation-based inference has been popular for amortized Bayesian computation. It is typical to have more than one posterior approximation, from different inference algorithms, different architectures, or simply the randomness of…

We investigate pattern avoidance in alternating permutations and generalizations thereof. First, we study pattern avoidance in an alternating analogue of Young diagrams. In particular, we extend Babson-West's notion of shape-Wilf…