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Given two positions $i$ and $j$ in a string $T$ of length $N$, a longest common extension (LCE) query asks for the length of the longest common prefix between suffixes beginning at $i$ and $j$. A compressed LCE data structure is a data…

Data Structures and Algorithms · Computer Science 2016-11-22 Tomohiro I

The Lempel-Ziv 77 (LZ77) factorization is a fundamental compression scheme widely used in text processing and data compression. In this work, we investigate the time complexity of maintaining the LZ77 factorization of a dynamic string. By…

Data Structures and Algorithms · Computer Science 2025-10-28 Itai Boneh , Shay Golan , Matan Kraus

Re-Pair is an effective grammar-based compression scheme achieving strong compression rates in practice. Let $n$, $\sigma$, and $d$ be the text length, alphabet size, and dictionary size of the final grammar, respectively. In their original…

Data Structures and Algorithms · Computer Science 2016-11-07 Philip Bille , Inge Li Gørtz , Nicola Prezza

One of the most famous and investigated lossless data-compression scheme is the one introduced by Lempel and Ziv about 40 years ago. This compression scheme is known as "dictionary-based compression" and consists of squeezing an input…

Data Structures and Algorithms · Computer Science 2008-02-07 Paolo Ferragina , Igor Nitto , Rossano Venturini

There is a large literature devoted to the problem of finding an optimal (min-cost) prefix-free code with an unequal letter-cost encoding alphabet of size. While there is no known polynomial time algorithm for solving it optimally there are…

Information Theory · Computer Science 2007-07-13 Mordecai Golin , Li Jian

We propose algorithms that, given the input string of length $n$ over integer alphabet of size $\sigma$, construct the Burrows-Wheeler transform (BWT), the permuted longest-common-prefix (PLCP) array, and the LZ77 parsing in…

Data Structures and Algorithms · Computer Science 2020-12-09 Dominik Kempa

We introduce a new approach to LZ77 factorization that uses O(n/d) words of working space and O(dn) time for any d >= 1 (for polylogarithmic alphabet sizes). We also describe carefully engineered implementations of alternative approaches to…

Data Structures and Algorithms · Computer Science 2020-12-11 Juha Kärkkäinen , Dominik Kempa , Simon J. Puglisi

We present a new algorithm for computing the Lempel-Ziv Factorization (LZ77) of a given string of length $N$ in linear time, that utilizes only $N\log N + O(1)$ bits of working space, i.e., a single integer array, for constant size integer…

Data Structures and Algorithms · Computer Science 2013-10-08 Keisuke Goto , Hideo Bannai

Given a string $S$ of $n$ integers in $[0,\sigma)$, a range minimum query RMQ$(i, j)$ asks for the index of the smallest integer in $S[i \dots j]$. It is well known that the problem can be solved with a succinct data structure of size $2n +…

Data Structures and Algorithms · Computer Science 2019-05-30 Paweł Gawrychowski , Seungbum Jo , Shay Mozes , Oren Weimann

We study the approximate string matching and regular expression matching problem for the case when the text to be searched is compressed with the Ziv-Lempel adaptive dictionary compression schemes. We present a time-space trade-off that…

Data Structures and Algorithms · Computer Science 2007-05-23 Philip Bille , Rolf Fagerberg , Inge Li Goertz

Despite their ubiquity in NLP tasks, Long Short-Term Memory (LSTM) networks suffer from computational inefficiencies caused by inherent unparallelizable recurrences, which further aggravates as LSTMs require more parameters for larger…

Computation and Language · Computer Science 2019-08-28 Genta Indra Winata , Andrea Madotto , Jamin Shin , Elham J. Barezi , Pascale Fung

The \emph{longest common extension} (\emph{LCE}) problem is to preprocess a given string $w$ of length $n$ so that the length of the longest common prefix between suffixes of $w$ that start at any two given positions is answered quickly. In…

Data Structures and Algorithms · Computer Science 2017-02-27 Yuka Tanimura , Takaaki Nishimoto , Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…

Data Structures and Algorithms · Computer Science 2016-09-01 Shouhei Fukunaga , Yoshimasa Takabatake , I Tomohiro , Hiroshi Sakamoto

Re-Pair is a grammar compression scheme with favorably good compression rates. The computation of Re-Pair comes with the cost of maintaining large frequency tables, which makes it hard to compute Re-Pair on large scale data sets. As a…

Data Structures and Algorithms · Computer Science 2019-11-19 Dominik Köppl , Tomohiro I , Isamu Furuya , Yoshimasa Takabatake , Kensuke Sakai , Keisuke Goto

Cost-efficient compressive sensing is challenging when facing large-scale data, {\em i.e.}, data with large sizes. Conventional compressive sensing methods for large-scale data will suffer from low computational efficiency and massive…

Data Structures and Algorithms · Computer Science 2016-03-18 Sung-Hsien Hsieh , Chun-Shien Lu , Soo-Chang Pei

The Suffix Array is a classic text index enabling on-line pattern matching queries via simple binary search. The main drawback of the Suffix Array is that it takes linear space in the text's length, even if the text itself is extremely…

Data Structures and Algorithms · Computer Science 2025-03-19 Davide Cenzato , Lore Depuydt , Travis Gagie , Sung-Hwan Kim , Giovanni Manzini , Francisco Olivares , Nicola Prezza

Compressed sensing of simultaneously sparse and low-rank matrices enables recovery of sparse signals from a few linear measurements of their bilinear form. One important question is how many measurements are needed for a stable…

Information Theory · Computer Science 2016-07-01 Kiryung Lee , Yihong Wu , Yoram Bresler

Learning, prediction, and compression are intimately connected: a model that accurately predicts the next symbol in a sequence can be coupled with a source coder to compress that sequence near its information-theoretic limit. When tokenized…

Information Theory · Computer Science 2026-05-05 Vishnu Teja Kunde , Jean-Francois Chamberland , Krishna R. Narayanan , Jamison Ebert

We introduce height-bounded LZ encodings (LZHB), a new family of compressed representations that are variants of Lempel-Ziv parsings with a focus on bounding the worst-case access time to arbitrary positions in the text directly via the…

Data Structures and Algorithms · Computer Science 2024-04-26 Hideo Bannai , Mitsuru Funakoshi , Diptarama Hendrian , Myuji Matsuda , Simon J. Puglisi

The paper proposes an improved error-resilient Lempel-Ziv'77 (LZ'77) algorithm employing an adaptive amount of parity bits for error protection. It is a modified version of error resilient algorithm LZRS'77, proposed recently, which uses a…

Information Theory · Computer Science 2008-04-21 Tomaz Korosec , Saso Tomazic