English
Related papers

Related papers: Kernel-based aggregation of marker-level genetic a…

200 papers

When testing for the association of a single SNP with a phenotypic response, one usually considers an additive genetic model, assuming that the mean of of the response for the heterozygous state is the average of the means for the two…

Methodology · Statistics 2025-01-07 Dominic Edelmann , Fernando Castro-Prado , Jelle J. Goeman

Model merging is an effective strategy to merge multiple models for enhancing model performances, and more efficient than ensemble learning as it will not introduce extra computation into inference. However, limited research explores if the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-19 Hu Wang , Ibrahim Almakky , Congbo Ma , Numan Saeed , Mohammad Yaqub

One of the best ways of spotting previously undetected systematic errors in CMB experiments is to compare two independent observations of the same region. We derive a set of tools for comparing and combining CMB data sets, applicable also…

Astrophysics · Physics 2009-10-07 Max Tegmark

Interest in multioutput kernel methods is increasing, whether under the guise of multitask learning, multisensor networks or structured output data. From the Gaussian process perspective a multioutput Mercer kernel is a covariance function…

Machine Learning · Statistics 2009-12-18 Mauricio A. Álvarez , David Luengo , Michalis K. Titsias , Neil D. Lawrence

Quantum kernel methods are a promising branch of quantum machine learning, yet their effectiveness on diverse, high-dimensional, real-world data remains unverified. Current research has largely been limited to low-dimensional or synthetic…

Machine Learning · Computer Science 2026-02-19 Jiang Yuhan , Matthew Otten

Genomic copy number variation (CNV) is a large source of variation between organisms, and its consequences include phenotypic differences and genetic disorders. CNVs are commonly detected by hybridizing genomic DNA to microarrays of nucleic…

Kernel methods have been extensively utilized in machine learning for classification and prediction tasks due to their ability to capture complex non-linear data patterns. However, single kernel approaches are inherently limited, as they…

Machine Learning · Computer Science 2026-02-12 Qiyuan Shi , Jian Kang , Yi Li

Studies using assays to quantify the expression of thousands of genes on tens to thousands of cell samples have been carried out for over 20 years. Such assays are based on microarrays, DNA sequencing or other molecular technologies. All…

Statistics Theory · Mathematics 2025-06-18 Jiming Jiang , Johann A. Gagnon-Bartsch , Terence P. Speed

Key performance indicators(KPIs) are of great significance in the monitoring of wireless network service quality. The network service quality can be improved by adjusting relevant configuration parameters(CPs) of the base station. However,…

Networking and Internet Architecture · Computer Science 2022-12-16 Chen Zhu , Chengbo Qiu , Shaoyu Dou , Minghao Liao

Correlation networks derived from multivariate data appear in many applications across the sciences. These networks are usually dense and require sparsification to detect meaningful structure. However, current methods for sparsifying…

Physics and Society · Physics 2023-03-06 Magnus Neuman , Viktor Jonsson , Joaquín Calatayud , Martin Rosvall

This paper proposes general methods for the problem of multiple testing of a single hypothesis, with a standard goal of combining a number of p-values without making any assumptions about their dependence structure. An old result by…

Statistics Theory · Mathematics 2019-10-09 Vladimir Vovk , Ruodu Wang

Multiple kernel methods less consider the intrinsic manifold structure of multiple kernel data and estimate the consensus kernel matrix with quadratic number of variables, which makes it vulnerable to the noise and outliers within multiple…

Machine Learning · Computer Science 2024-10-22 Liang Du , Xin Ren , Haiying Zhang , Peng Zhou

The availability of large-scale annotated image datasets and recent advances in supervised deep learning methods enable the end-to-end derivation of representative image features that can impact a variety of image analysis problems. Such…

Computer Vision and Pattern Recognition · Computer Science 2020-06-23 Euijoon Ahn , Jinman Kim , Ashnil Kumar , Michael Fulham , Dagan Feng

Databases in domains such as healthcare are routinely released to the public in aggregated form. Unfortunately, naive modeling with aggregated data may significantly diminish the accuracy of inferences at the individual level. This paper…

Machine Learning · Statistics 2016-05-17 Avradeep Bhowmik , Joydeep Ghosh , Oluwasanmi Koyejo

The growing volume of data makes the use of computationally intense machine learning techniques such as symbolic regression with genetic programming more and more impractical. This work discusses methods to reduce the training data and…

Machine Learning · Computer Science 2021-08-25 Lukas Kammerer , Gabriel Kronberger , Michael Kommenda

Identifying significant subsets of the genes, gene shaving is an essential and challenging issue for biomedical research for a huge number of genes and the complex nature of biological networks,. Since positive definite kernel based methods…

Machine Learning · Statistics 2018-09-06 Md. Ashad Alam , Mohammad Shahjama , Md. Ferdush Rahman

In this paper, we introduce a novel method for merging the weights of multiple pre-trained neural networks using a genetic algorithm called MeGA. Traditional techniques, such as weight averaging and ensemble methods, often fail to fully…

Neural and Evolutionary Computing · Computer Science 2024-07-01 Daniel Yun

We propose novel statistics which maximise the power of a two-sample test based on the Maximum Mean Discrepancy (MMD), by adapting over the set of kernels used in defining it. For finite sets, this reduces to combining (normalised) MMD…

Machine Learning · Statistics 2023-10-31 Felix Biggs , Antonin Schrab , Arthur Gretton

Understanding representational similarity between neural recordings and computational models is essential for neuroscience, yet remains challenging to measure reliably due to the constraints on the number of neurons that can be recorded…

Disordered Systems and Neural Networks · Physics 2025-10-27 Hyunmo Kang , Abdulkadir Canatar , SueYeon Chung

Several statistical approaches based on reproducing kernels have been proposed to detect abrupt changes arising in the full distribution of the observations and not only in the mean or variance. Some of these approaches enjoy good…

Statistics Theory · Mathematics 2017-10-13 Alain Celisse , Guillemette Marot , Morgane Pierre-Jean , Guillem Rigaill