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With the increasing availability of structured and unstructured data and the swift progress of analytical techniques, Artificial Intelligence (AI) is bringing a revolution to the healthcare industry. With the increasingly indispensable role…

Machine Learning · Computer Science 2020-11-09 Devam Dave , Het Naik , Smiti Singhal , Pankesh Patel

Early outbreak detection is a key aspect in the containment of infectious diseases, as it enables the identification and isolation of infected individuals before the disease can spread to a larger population. Instead of detecting unexpected…

Machine Learning · Computer Science 2021-10-19 Michael Rapp , Moritz Kulessa , Eneldo Loza Mencía , Johannes Fürnkranz

With the rapid development of high-throughput sequencing platforms, an increasing number of omics technologies, such as genomics, metabolomics, and transcriptomics, are being applied to disease genetics research. However, biological data…

Genomics · Quantitative Biology 2024-12-18 Lei Xin , Caiyun Huang , Hao Li , Shihong Huang , Yuling Feng , Zhenglun Kong , Zicheng Liu , Siyuan Li , Chang Yu , Fei Shen , Hao Tang

With the large volume of unstructured data that increases constantly on the web, the motivation of representing the knowledge in this data in the machine-understandable form is increased. Ontology is one of the major cornerstones of…

Computation and Language · Computer Science 2021-05-10 Fatima N. AL-Aswadi , Huah Yong Chan , Keng Hoon Gan

Retrieval-augmented learning based on radiology reports has emerged as a promising direction to improve performance on long-tail medical imaging tasks, such as rare disease detection in chest X-rays. Most existing methods rely on comparing…

Machine Learning · Computer Science 2025-08-28 Felix Nützel , Mischa Dombrowski , Bernhard Kainz

Understanding large, structured documents like scholarly articles, requests for proposals or business reports is a complex and difficult task. It involves discovering a document's overall purpose and subject(s), understanding the function…

Computation and Language · Computer Science 2018-07-27 Muhammad Mahbubur Rahman , Tim Finin

The Belief-Desire-Intention (BDI) model is a cornerstone for representing rational agency in artificial intelligence and cognitive sciences. Yet, its integration into structured, semantically interoperable knowledge representations remains…

The Interaction between Drugs and Targets (DTI) in human body plays a crucial role in biomedical science and applications. As millions of papers come out every year in the biomedical domain, automatically discovering DTI knowledge from…

Computation and Language · Computer Science 2021-09-28 Yutai Hou , Yingce Xia , Lijun Wu , Shufang Xie , Yang Fan , Jinhua Zhu , Wanxiang Che , Tao Qin , Tie-Yan Liu

Tools to explore scientific literature are essential for scientists, especially in biomedicine, where about a million new papers are published every year. Many such tools provide users the ability to search for specific entities (e.g.…

Computation and Language · Computer Science 2021-07-05 Sunil Mohan , Rico Angell , Nick Monath , Andrew McCallum

While classical planning languages make the closed-domain and closed-world assumption, there have been various approaches to extend those with DL reasoning, which is then interpreted under the usual open-world semantics. Current approaches…

Artificial Intelligence · Computer Science 2023-08-17 Tobias John , Patrick Koopmann

Managing the growing data from renewable energy production plants for effective decision-making often involves leveraging Ontology-based Data Access (OBDA), a well-established approach that facilitates querying diverse data through a shared…

Databases · Computer Science 2024-10-17 Marco Calautti , Damiano Duranti , Paolo Giorgini

In this paper, we introduce a novel interpreting framework that learns an interpretable model based on an ontology-based sampling technique to explain agnostic prediction models. Different from existing approaches, our algorithm considers…

Machine Learning · Computer Science 2020-04-02 Phung Lai , NhatHai Phan , Han Hu , Anuja Badeti , David Newman , Dejing Dou

Translating biomedical ontologies is an important challenge, but doing it manually requires much time and money. We study the possibility to use open-source knowledge bases to translate biomedical ontologies. We focus on two aspects:…

Quantitative Methods · Quantitative Biology 2020-04-08 Léo Bouscarrat , Antoine Bonnefoy , Cécile Capponi , Carlos Ramisch

Cancer has relational information residing at varying scales, modalities, and resolutions of the acquired data, such as radiology, pathology, genomics, proteomics, and clinical records. Integrating diverse data types can improve the…

Machine Learning · Computer Science 2024-07-29 Asim Waqas , Aakash Tripathi , Ravi P. Ramachandran , Paul Stewart , Ghulam Rasool

Despite the availability of vast amounts of data, legal data is often unstructured, making it difficult even for law practitioners to ingest and comprehend the same. It is important to organise the legal information in a way that is useful…

Artificial Intelligence · Computer Science 2024-05-24 Aniket Deroy , Naksatra Kumar Bailung , Kripabandhu Ghosh , Saptarshi Ghosh , Abhijnan Chakraborty

This manuscript presents a methodical examination of the utilization of Artificial Intelligence in the assessment of emotions in texts related to healthcare, with a particular focus on the incorporation of Natural Language Processing and…

Computation and Language · Computer Science 2024-04-22 Prashant Kumar Nag , Amit Bhagat , R. Vishnu Priya , Deepak kumar Khare

This Ontologies are widely used as a means for solving the information heterogeneity problems on the web because of their capability to provide explicit meaning to the information. They become an efficient tool for knowledge representation…

Artificial Intelligence · Computer Science 2013-06-04 Nora Y. Ibrahim , Sahar A. Mokhtar , Hany M. Harb

The emergence of artificial intelligence (AI), particularly deep learning (DL), has marked a new era in the realm of ophthalmology, offering transformative potential for the diagnosis and treatment of posterior segment eye diseases. This…

Image and Video Processing · Electrical Eng. & Systems 2025-01-09 Duy M. H. Nguyen , Hasan Md Tusfiqur Alam , Tai Nguyen , Devansh Srivastav , Hans-Juergen Profitlich , Ngan Le , Daniel Sonntag

Though deep learning has shown successful performance in classifying the label and severity stage of certain disease, most of them give few evidence on how to make prediction. Here, we propose to exploit the interpretability of deep…

Computer Vision and Pattern Recognition · Computer Science 2020-03-16 Yuhao Niu , Lin Gu , Feng Lu , Feifan Lv , Zongji Wang , Imari Sato , Zijian Zhang , Yangyan Xiao , Xunzhang Dai , Tingting Cheng

Ontology development methodologies emphasise knowledge gathering from domain experts and documentary resources, and knowledge representation using an ontology language such as OWL or FOL. However, working ontologists are often surprised by…

Artificial Intelligence · Computer Science 2023-01-11 Fabian Neuhaus , Janna Hastings