Related papers: Unfolding Large Biomolecules
The dynamics of a quantum particle bound by an accelerating delta-functional potential is investigated. Three cases are considered, using the reference frame moving along with the {\delta}-function, in which the acceleration is converted…
Transporting charged particles between different traps has become an important feature in high-precision spectroscopy experiments of different types. In many experiments in atomic and molecular physics, the optical probing of the ions is…
Life occurs in ionic solutions, not pure water. The ionic mixtures of these solutions are very different from water and have dramatic effects on the cells and molecules of biological systems, yet theories and simulations cannot calculate…
Phototaxis, the process by which living organisms navigate toward optimal light conditions, is essential for motile photosynthetic microorganisms. Positive(negative) phototaxis denotes the motion directed towards(away from) the source of…
Biomolecular condensates play a central role in the spatial organization of living matter. Their formation is now well understood as a form of liquid-liquid phase separation that occurs very far from equilibrium. For instance, they can be…
Through extensive studies of dynamical system modeling cellular growth and reproduction, we find evidence that complexity arises in multicellular organisms naturally through evolution. Without any elaborate control mechanism, these systems…
Test modes on turbulent magnetized plasmas are studied taking into account the ion trapping that characterizes the E x B drift in the background turbulence. We show that trappyng provides the physical mechanism for the formation of large…
We introduce a measurement scheme that utilizes a single ion as a local field probe. The ion is confined in a segmented Paul trap and shuttled around to reach different probing sites. By the use of a single atom probe, it becomes possible…
Thorium ions exhibit unique nuclear properties with high relevance for testing symmetries of nature, and Paul traps feature an ideal experimental platform for performing high precision quantum logic spectroscopy. Loading of stable or…
The dynamical behavior of two types of non-equilibrium systems is discussed: $(a)$ two-dimensional cellular structures, and $(b)$ living polymers. Simple models governing their evolution are introduced and steady state distributions (cell…
We investigate the problem of a single ion in a radio-frequency trap and immersed in an ultracold Bose gas either in a condensed or a non-condensed phase. We develop master equation formalism describing the sympathetic cooling and we…
Ion traps are a versatile tool to study nonequilibrium statistical physics, due to the tunability of dissipation and nonlinearity. We propose an experiment with a chain of trapped ions, where dissipation is provided by laser heating and…
Living systems continuously transform matter and energy through the chemical processes that constitute their metabolism. The overall metabolic rate of an organism correlates positively with its body mass, however both the exact scaling…
The evolution of the entanglement between two oscillators coupled to a common thermal environment is non-trivial. The long time limit has three qualitatively different behaviors (phases) depending on parameters such as the temperature of…
We present a game of interacting agents which mimics the complex dynamics found in many natural and social systems. These agents modify their strategies periodically, depending on their performances using genetic crossover mechanisms,…
The dynamics of particles interacting by key-lock binding of attached biomolecules are studied theoretically. Examples of such systems include DNA-functionalized colloids as well as nanoparticles grafted with antibodies to cell membrane…
Throughout our history, we, humans, have sought to better control and understand our environment. To this end, we have extended our natural senses with a host of sensors-tools that enable us to detect both the very large, such as the…
Active emulsions and liquid crystalline shells are intriguing and experimentally realisable types of topological matter. Here we numerically study the morphology and spatiotemporal dynamics of a double emulsion, where one or two passive…
Molecular dynamics simulations have been performed on pure liquid water, aqueous solutions of sodium chloride, and polymer solutions exposed to a strong external electric field with the goal to gain molecular insight into the structural…
Colloidal mixtures represent a versatile model system to study transport in complex environments. They allow for a systematic variation of the control parameters, namely size ratio, total volume fraction and composition. We study the…