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We carry out a first-principles atomistic study of the electronic mechanisms of ligand binding and discrimination in the myoglobin protein. Electronic correlation effects are taken into account using one of the most advanced methods…

Chemical Physics · Physics 2014-04-29 Cedric Weber , Daniel J. Cole , David D. O'Regan , Mike C. Payne

Ensemble Density Functional Theory (EDFT) is a promising extension to Density Functional Theory (DFT) for calculating excited states. While Kohn-Sham eigenvalue differences underestimate gaps, EDFT has been shown to provide more accurate…

Materials Science · Physics 2026-02-10 Gregory G. V. Kenning , Remi J. Leano , David A. Strubbe

Quantum embedding schemes have the potential to significantly reduce the computational cost of first principles calculations, whilst maintaining accuracy, particularly for calculations of electronic excitations in complex systems. In this…

Materials Science · Physics 2022-03-10 Joseph C. A. Prentice

Herein, we present a new method to efficiently calculate electronically excited states in large molecular assemblies, consisting of hundreds of molecules. For this purpose, we combine the long-range corrected tight-binding…

Chemical Physics · Physics 2023-02-08 Richard Einsele , Joscha Hoche , Roland Mitric

It will be shown how to map a simple one-dimensional tight binding model with a cosine potential in one dimension exactly to a two dimensional tight binding model with periodic boundary conditions with the presence of a single flux quantum…

Strongly Correlated Electrons · Physics 2011-06-29 Stellan Ostlund

We discuss the conditions for an effective field theory (EFT) to give an adequate low-energy description of an underlying physics beyond the Standard Model (SM). Starting from the EFT where the SM is extended by dimension-6 operators,…

High Energy Physics - Phenomenology · Physics 2016-09-08 Roberto Contino , Adam Falkowski , Florian Goertz , Christophe Grojean , Francesco Riva

We present large-scale molecular dynamics (MD) simulations based on a machine-learning interatomic potential to investigate the wet etching behavior of various GaN facets in alkaline solution-a process critical to the fabrication of…

Materials Science · Physics 2025-05-14 Purun-hanul Kim , Jeong Min Choi , Seungwu Han , Youngho Kang

Quantum mechanical methods based on the density functional theory (DFT) offer a realistic possibility of first-principles design of organic donor-acceptor systems and engineered band-gap materials. This promise is contingent upon the…

Chemical Physics · Physics 2013-12-03 Marcin Modrzejewski , Grzegorz Chałasiński , Małgorzata M. Szczęśniak

Experiment Directed Simulations (EDS) is a method within a class of techniques seeking to improve molecular simulations by minimally biasing the system Hamiltonian to reproduce certain experimental observables. In a previous application of…

Chemical Physics · Physics 2020-06-04 Paul B. Calio , Glen M. Hocky , Gregory A. Voth

We report initial research to develop a compact and practical primary thermometer based on Doppler broadening thermometry (DBT). The DBT sensor uses an intrinsic property of thermalized atoms, namely, the Doppler width of a spectral line…

Atomic Physics · Physics 2025-01-29 Nicola Agnew , Graham Machin , Erling Riis , Aidan S. Arnold

Nuclear energy density functionals (EDFs) have a long history of success in reproducing properties of nuclei across the table of the nuclides. They capture quantitatively the emergent features of bound nuclei, such as nuclear saturation and…

Nuclear Theory · Physics 2020-06-24 R. J. Furnstahl

The simulation of charge transport in ultra-scaled electronic devices requires the knowledge of the atomic configuration and the associated potential. Such "atomistic" device simulation is most commonly handled using a tight-binding…

Mesoscale and Nanoscale Physics · Physics 2019-10-02 Maarten L. Van de Put , Massimo V. Fischetti , William G. Vandenberghe

Electron-phonon coupling (EPC) is key for understanding many properties of materials such as superconductivity and electric resistivity. Although first principles density-functional-theory (DFT) based EPC calculations are used widely, their…

We propose an approach that links density functional theory (DFT) and molecular dynamics (MD) simulation to study fluid behavior in nanopores in contact with bulk (macropores). It consists of two principal steps. First, the theoretical…

Computational Physics · Physics 2021-07-06 Mariia Vaganova , Irina Nesterova , Yuriy Kanygin , Andrey Kazennov , Aleksey Khlyupin

Extremely large antenna arrays (ELAAs) operating in high-frequency bands have spurred the development of near-field communication, driving advancements in beam training design. This paper introduces an efficient near-field beam training…

Signal Processing · Electrical Eng. & Systems 2025-05-21 Zijun Wang , Rama Kiran , Shawn Tsai , Rui Zhang

With the advent of new synthesis and large-scale production technologies, nanostructured gas-adsorbent materials (GAM) like carbon nanocomposites and metal-organic frameworks are becoming increasingly more influential in our everyday lives.…

Materials Science · Physics 2015-04-01 Claudio Cazorla

First-principles density functional theory (DFT) codes which employ a localized basis offer advantages over those which use plane-wave bases, such as better scaling with system size and better suitability to low-dimensional systems. The…

Materials Science · Physics 2024-11-25 Daniel Bennett , Michele Pizzochero , Javier Junquera , Efthimios Kaxiras

Using a computationally inexpensive frozen phonon approach we have developed a technique which can be used to screen large unit cell materials and systems for enhanced superconducting critical temperatures. The method requires only density…

Superconductivity · Physics 2024-05-07 Oliver A. Dicks , Kateryna Foyevtsova , Ilya Elfimov , Rohit Prasankumar , George Sawatzky

The embedded atom method (EAM) is one of the most widely used many-body, short-range potentials in molecular dynamics simulations, particularly for metallic systems. To enhance the efficiency of calculating these short-range interactions,…

Materials Science · Physics 2025-03-25 Jieqiong Zhang , Jizu Huang , Zihao Yang

We review the simple linear muffin-tin orbital method in the atomic-spheres approximation and a tight-binding representation (TB-LMTO-ASA method), and show how it can be generalized to an accurate and robust Nth order muffin-tin orbital…

Condensed Matter · Physics 2009-09-25 O. K. Andersen , T. Saha-Dasgupta , R. W. Tank , C. Arcangeli , O. Jepsen , G. Krier
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