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We discuss a theoretical model for bidirectional cargo transport in biological cells, which is driven by teams of molecular motors and subject to thermal fluctuations. The model describes explicitly the directed motion of the molecular…

Biological Physics · Physics 2017-09-20 Sarah Klein , Cécile Appert-Rolland , Ludger Santen

We investigate the dynamics of stage II retinal waves via a dynamical system, grounded on biophysics, and analysed with bifurcation theory. We show how the nonlinear cells coupling and bifurcation structure explain how waves start,…

Adaptation and Self-Organizing Systems · Physics 2023-08-25 Bruno Cessac , Dora Matzakou-Karvouniari

Many multicellular communities propagate signals in a directed manner via excitable waves. Cell-to-cell heterogeneity is a ubiquitous feature of multicellular communities, but the effects of heterogeneity on wave propagation are still…

Biological Physics · Physics 2020-04-22 Xiaoling Zhai , Joseph W. Larkin , Gürol M. Süel , Andrew Mugler

Morphogen profiles allow cells to determine their position within a developing organism, but the mechanisms behind the formation of these profiles are still not well agreed upon. Here we derive fundamental limits to the precision of…

Biological Physics · Physics 2018-06-26 Sean Fancher , Andrew Mugler

Diffusion, a fundamental internal mechanism emerging in many physical processes, describes the interaction among different objects. In many learning tasks with limited training samples, the diffusion connects the labeled and unlabeled data…

Machine Learning · Computer Science 2023-05-02 Tangjun Wang , Zehao Dou , Chenglong Bao , Zuoqiang Shi

An electron beam traversing a structured plasmonic field is shown to undergo diffraction with characteristic angular patterns of both elastic and inelastic outgoing electron components. In particular, a plasmonic {\it grating} (e.g., a…

Mesoscale and Nanoscale Physics · Physics 2016-07-20 F. Javier Garcia de Abajo , Brett Barwick , Fabrizio Carbone

The aim of this paper is to provide a mathematical model for spatial distribution of membrane electrical potential changes by fluorescence diffuse optical tomography. We derive the resolving power of the imaging method in the presence of…

Mathematical Physics · Physics 2013-07-09 Habib Ammari , Josselin Garnier , Laure Giovangigli

Cell division is an essential biological process, and regulation of cell division is of relevance for many important fields of biology and medicine. Introducing exogenous substances, such as nanoparticles, into the nucleus, has been…

Biological Physics · Physics 2022-06-09 Bin Kang

Diffusion across surfaces generally involves motion on a vibrating but otherwise stationary substrate. Here, using molecular dynamics, we show that a layered material such as graphene opens up a new mechanism for surface diffusion whereby…

Chemical Physics · Physics 2016-11-30 Ming Ma , Gabriele Tocci , Angelos Michaelides , Gabriel Aeppli

Background and controlled electromagnetic radiation (EMR) on biological cells and tissues induces thermal, non-thermal, and dielectric property change. After EMR interaction with cells/tissues the resulting signal is used for imaging,…

Biological Physics · Physics 2020-12-24 Biswadev Roy , Suryakant Niture , Marvin H. Wu

Various biological cells secrete diffusing chemical compounds into their environment for communication purposes. Secretion usually takes place over the cell membrane in a spatially heterogeneous manner. Mathematical models of these…

Numerical Analysis · Mathematics 2025-11-20 Qiyao Peng , Sander C. Hille

By solving Maxwell equations with the ideal-metal boundary conditions in the TM case, we have fully described the transmission and diffraction properties of a single slit regardless of its width. Efficiencies of the main transformation…

Materials Science · Physics 2015-05-18 B. Sturman , E. Podivilov , M. Gorkunov

The experimental conditions by which electromagnetic signals (EMS) of low frequency can be emitted by diluted aqueous solutions of some bacterial and viral DNAs are described. That the recorded EMS and nanostructures induced in water carry…

The infection pathway of virus in cytoplasm of a living cell is studied from the viewpoint of diffusion theory. The cytoplasm plays a role of a medium for stochastic motion of the virus contained in the endosome as well as the free virus.…

Biological Physics · Physics 2010-03-04 Yuichi Itto

A modification of the Drude dispersive model based on fractional time derivative is presented. The dielectric susceptibility is calculated analytically and simulated numerically, showing a good agreement between theoretical description and…

Computational Physics · Physics 2021-03-23 Karol Karpiński , Sylwia Zielińska - Raczyńska , David Ziemkiewicz

A simple experiment is presented which indicates that electromagnetic fields propagate superluminally in the near-field next to an oscillating electric dipole source. A high frequency 437MHz, 2 watt sinusoidal electrical signal is…

General Physics · Physics 2007-05-23 William D. Walker

Diffusion MRI is a neuroimaging technique measuring the anatomical structure of tissues. Using diffusion MRI to construct the connections of tissues, known as fiber tracking, is one of the most important uses of diffusion MRI. Many…

Methodology · Statistics 2019-06-18 Zhou Lan , Brian J Reich

From the earth's crust to the human brain, remitted waves are used for sensing and imaging in a diverse range of diffusive media. Separating the source and detector increases the penetration depth of remitted light, yet rapidly decreases…

The physical limit with which a cell senses external ligand concentration corresponds to the perfect absorber, where all ligand particles are absorbed and overcounting of same ligand particles does not occur. Here we analyze how the lateral…

Subcellular Processes · Quantitative Biology 2015-11-06 Gerardo Aquino , Robert G. Endres

Over the past few decades, magnetic resonance imaging has been utilized as a powerful imaging modality to evaluate the structure and function of various organs in the human body,such as the brain. Additionally, diffusion and perfusion MR…

Medical Physics · Physics 2016-12-12 Sanam Assili