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To model biological systems using networks, it is desirable to allow more than two levels of expression for the nodes and to allow the introduction of parameters. Various modeling and simulation methods addressing these needs using Boolean…

Molecular Networks · Quantitative Biology 2014-04-23 Yi Ming Zou

A broad set of empirical phenomenon in the study of social, economic and machine behaviour can be modelled as complex systems with averaging dynamics. However many of these models naturally result in consensus or consensus-like outcomes. In…

Multiagent Systems · Computer Science 2020-07-03 Orowa Sikder

This paper concerns the modeling and numerical simulation of the process of speciation. In particular, given conditions for which one or more speciation events within an ecosystem occur, our aim is to develop the necessary modeling and…

Populations and Evolution · Quantitative Biology 2021-10-08 Mats K. Brun , Elyes Ahmed , Jan Martin Nordbotten , Nils Christian Stenseth

Modeling multi-agent systems requires understanding how agents interact. Such systems are often difficult to model because they can involve a variety of types of interactions that layer together to drive rich social behavioral dynamics.…

Machine Learning · Computer Science 2023-01-26 Fan-Yun Sun , Isaac Kauvar , Ruohan Zhang , Jiachen Li , Mykel Kochenderfer , Jiajun Wu , Nick Haber

In recent years, post-hoc local instance-level and global dataset-level explainability of black-box models has received a lot of attention. Much less attention has been given to obtaining insights at intermediate or group levels, which is a…

Machine Learning · Computer Science 2020-10-06 Karthikeyan Natesan Ramamurthy , Bhanukiran Vinzamuri , Yunfeng Zhang , Amit Dhurandhar

We propose a method to teach multiple large language models (LLM) to collaborate by interleaving their generations at the token level. We model the decision of which LLM generates the next token as a latent variable. By optimizing the…

Computation and Language · Computer Science 2024-08-28 Shannon Zejiang Shen , Hunter Lang , Bailin Wang , Yoon Kim , David Sontag

Large-scale multi-relational embedding refers to the task of learning the latent representations for entities and relations in large knowledge graphs. An effective and scalable solution for this problem is crucial for the true success of…

Machine Learning · Computer Science 2017-07-07 Hanxiao Liu , Yuexin Wu , Yiming Yang

Research in cell biology is steadily contributing new knowledge about many different aspects of physiological processes like polymerization, both with respect to the involved molecular structures as well as their related function.…

Human-Computer Interaction · Computer Science 2014-07-15 Ivan Kolesar , Julius Parulek , Ivan Viola , Stefan Bruckner , Anne-Kristin Stavrum , Helwig Hauser

Modern display environments offer great potential for involving multiple users in presentations, discussions, and data analysis sessions. By showing multiple views on multiple displays, information exchange can be improved, several…

Graphics · Computer Science 2019-12-19 Christian Eichner , Heidrun Schumann , Christian Tominski

As Physics did in previous centuries, there is currently a common dream of extracting generic laws of nature in economics, sociology, neuroscience, by focalising the description of phenomena to a minimal set of variables and parameters,…

Physics and Society · Physics 2016-10-14 Fatihcan M. Atay , Sven Banisch , Philippe Blanchard , Bruno Cessac , Eckehard Olbrich

Various data modalities are common in real-world applications (e.g., electronic health records, medical images and clinical notes in healthcare). It is essential to develop multimodal learning methods to aggregate various information from…

Machine Learning · Computer Science 2025-11-06 Feng Wu , Tsai Hor Chan , Fuying Wang , Guosheng Yin , Lequan Yu

Abstractions of causal models allow for the coarsening of models such that relations of cause and effect are preserved. Whereas abstractions focus on the relation between two models, in this paper we study a framework for causal embeddings…

Artificial Intelligence · Computer Science 2026-03-02 Willem Schooltink , Fabio Massimo Zennaro

Many real-world problems are inherently multimodal, from spoken language, gestures, and paralinguistics humans use to communicate, to force, proprioception, and visual sensors on robots. While there has been an explosion of interest in…

LLMs are increasingly used to support qualitative research, yet existing systems produce outputs that vary widely--from trace-faithful summaries to theory-mediated explanations and system models. To make these differences explicit, we…

Computation and Language · Computer Science 2026-01-21 Xinyu Pi , Qisen Yang , Chuong Nguyen , Hua Shen

We introduce relational hyperevent models (RHEM) as a generalization of relational event models to events occurring on hyperedges involving any number of actors. RHEM can specify time-varying event rates for the full space of directed or…

Social and Information Networks · Computer Science 2019-12-17 Jürgen Lerner , Mark Tranmer , John Mowbray , Marian-Gabriel Hancean

A flow of moving agents can be observed at different scales. Thus, in traffic modeling, three levels are generally considered: the micro, meso and macro levels, representing respectively the interactions between vehicles, groups of vehicles…

Multiagent Systems · Computer Science 2014-01-28 Hassane Abouaïssa , Yoann Kubera , Gildas Morvan

Multilayer networks represent systems in which there are several topological levels each one representing one kind of interaction or interdependency between the systems' elements. These networks have attracted a lot of attention recently…

Physics and Society · Physics 2015-04-22 Emanuele Cozzo , Guilherme Ferraz de Arruda , Francisco A. Rodrigues , Yamir Moreno

Heterogeneity is one important feature of complex systems, leading to the complexity of their construction and analysis. Moving the heterogeneity at model level helps in mastering the difficulty of composing heterogeneous models which…

Software Engineering · Computer Science 2017-07-24 J. Christian Attiogbé

Flocking is a behavior where multiple agents in a system attempt to stay close to each other while avoiding collision and maintaining a desired formation. This is observed in the natural world and has applications in robotics, including…

Artificial Intelligence · Computer Science 2024-12-18 Peihan Li , Vishnu Menon , Bhavanaraj Gudiguntla , Daniel Ting , Lifeng Zhou

In this paper, we present our position for a neuralsymbolic integration strategy, arguing in favor of a hybrid representation to promote an effective integration. Such description differs from others fundamentally, since its entities aim at…

Artificial Intelligence · Computer Science 2019-12-19 Marcio Moreno , Daniel Civitarese , Rafael Brandao , Renato Cerqueira