English
Related papers

Related papers: Hierarchical clustering for graph visualization

200 papers

When analyzing complex networks a key target is to uncover their modular structure, which means searching for a family of modules, namely node subsets spanning each a subnetwork more densely connected than the average. This work proposes a…

Discrete Mathematics · Computer Science 2018-09-10 Giovanni Rossi

Unsupervised clustering, also known as natural clustering, stands for the classification of data according to their similarities. Here we study this problem from the perspective of complex networks. Mapping the description of data…

Data Analysis, Statistics and Probability · Physics 2012-08-22 Clara Granell , Sergio Gomez , Alex Arenas

Dimensionality reduction methods such as t-SNE and UMAP are popular methods for visualizing data with a potential (latent) clustered structure. They are known to group data points at the same time as they embed them, resulting in…

Machine Learning · Computer Science 2025-09-04 Elizabeth Coda , Ery Arias-Castro , Gal Mishne

The clustering method based on graph models has garnered increased attention for its widespread applicability across various knowledge domains. Its adaptability to integrate seamlessly with other relevant applications endows the graph…

Machine Learning · Computer Science 2025-04-02 Xinrun Xu , Manying Lv , Zhanbiao Lian , Yurong Wu , Jin Yan , Shan Jiang , Zhiming Ding

In this paper we introduce a new method to locate highly connected clusters in a network. Our proposed approach adapts the HyperBall algorithm to localize regions with a high density of small subgraph patterns in large graphs in a…

Social and Information Networks · Computer Science 2021-08-11 Lotte Weedage , Nelly Litvak , Clara Stegehuis

The structure of many complex networks includes edge directionality and weights on top of their topology. Network analysis that can seamlessly consider combination of these properties are desirable. In this paper, we study two important…

Social and Information Networks · Computer Science 2021-11-24 Frederique Oggier , Silivanxay Phetsouvanh , Anwitaman Datta

We present a probabilistic graphical model formulation for the graph clustering problem. This enables to locally represent uncertainty of image partitions by approximate marginal distributions in a mathematically substantiated way, and to…

Computer Vision and Pattern Recognition · Computer Science 2016-01-12 Jörg Hendrik Kappes , Paul Swoboda , Bogdan Savchynskyy , Tamir Hazan , Christoph Schnörr

In many applications, multivariate samples may harbor previously unrecognized heterogeneity at the level of conditional independence or network structure. For example, in cancer biology, disease subtypes may differ with respect to…

Machine Learning · Statistics 2013-01-11 Steven M. Hill , Sach Mukherjee

The primary goal in cluster analysis is to discover natural groupings of objects. The field of cluster analysis is crowded with diverse methods that make special assumptions about data and address different scientific aims. Despite its…

Genomics · Quantitative Biology 2018-06-07 Gary K. Chen , Eric Chi , John Ranola , Kenneth Lange

This paper proposes a hierarchical clustering approach for the segmentation of mobile LiDAR point clouds. We perform the hierarchical clustering on unorganized point clouds based on a proximity matrix. The dissimilarity measure in the…

Computer Vision and Pattern Recognition · Computer Science 2019-06-12 Sheng Xu , Ruisheng Wang , Han Zheng

In a wide variety of situations, anomalies in the behaviour of a complex system, whose health is monitored through the observation of a random vector X = (X1,. .. , X d) valued in R d , correspond to the simultaneous occurrence of extreme…

Methodology · Statistics 2019-07-18 Maël Chiapino , Stéphan Clémençon , Vincent Feuillard , Anne Sabourin

We present Clusterplot, a multi-class high-dimensional data visualization tool designed to visualize cluster-level information offering an intuitive understanding of the cluster inter-relations. Our unique plots leverage 2D blobs devised to…

Graphics · Computer Science 2021-03-05 Or Malkai , Min Lu , Daniel Cohen-Or

Graph clustering has been studied extensively on both plain graphs and attributed graphs. However, all these methods need to partition the whole graph to find cluster structures. Sometimes, based on domain knowledge, people may have…

Machine Learning · Computer Science 2020-03-26 Wei Ye , Dominik Mautz , Christian Boehm , Ambuj Singh , Claudia Plant

A hypergraph is a useful combinatorial object to model ternary or higher-order relations among entities. Clustering hypergraphs is a fundamental task in network analysis. In this study, we develop two clustering algorithms based on…

Data Structures and Algorithms · Computer Science 2021-10-27 Yuuki Takai , Atsushi Miyauchi , Masahiro Ikeda , Yuichi Yoshida

Interactive visualization of embedding projections is a useful technique for understanding data and evaluating machine learning models. Labeling data within these visualizations is critical for interpretation, as labels provide an overview…

Human-Computer Interaction · Computer Science 2025-05-20 Donghao Ren , Fred Hohman , Dominik Moritz

Multilayer graphs are appealing mathematical tools for modeling multiple types of relationship in the data. In this paper, we aim at analyzing multilayer graphs by properly combining the information provided by individual layers, while…

Machine Learning · Computer Science 2020-10-30 Mireille El Gheche , Pascal Frossard

Currently, data-driven discovery in biological sciences resides in finding segmentation strategies in multivariate data that produce sensible descriptions of the data. Clustering is but one of several approaches and sometimes falls short…

Quantitative Methods · Quantitative Biology 2022-08-12 Richard Tjörnhammar

For data represented by networks, the community structure of the underlying graph is of great interest. A classical clustering problem is to uncover the overall ``best'' partition of nodes in communities. Here, a more elaborate description…

Physics and Society · Physics 2013-11-11 Nicolas Tremblay , Pierre Borgnat

Mode-based clustering methods define clusters to be the basins of attraction of the modes of a density estimate. The most common version is mean shift clus- tering which uses a gradient ascent algorithm to find the basins. Rodriguez and…

Methodology · Statistics 2018-05-14 Isabella Verdinelli , Larry Wasserman

In the paper a piecewise constant image approximations of sequential number of pixel clusters or segments are treated. A majorizing of optimal approximation sequence by hierarchical sequence of image approximations is studied. Transition…

Computer Vision and Pattern Recognition · Computer Science 2014-06-03 M. Kharinov